Introduction

This manual describes the different steps needed to make a full comparison of nucleosome occupancy and modification profile. The steps described in this manual are similar to the steps performed for the results published in the article (5). We assume that NucleoMiner has been previously installed on your machine and that it is correctly running. Otherwise please see the NucleoMiner manual. Assume that your:

• $PATH is configurated properly
• $PERLLIB is configurated properly
• $LD_LIBRARY_PATH is configurated properly