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This program reports the fraction of genomic annotation that overlap with each nucleosome interrogated with NManova2.
Short | Long | Description
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-i | –input | The input directory
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-d | –data | The data
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-o | –output | The output file
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-s | –seqid | The name of the chromosome to focus on
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-f | –feature | A GFF (version 3) file providing the genomic annotations
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-l | –feature-id | A file listing the features to consider
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