====== BCFtools ======

  * BCFtools implements utilities for variant calling (in conjunction with [[documentation:tools:software:samtools|SAMtools]]) and manipulating Variant Call Format (VCF) files and its binary counterpart BCF files.


^  Version  ^  Compilateur  ^  Interconnexion  ^  chemin d'accès  ^  OS  ^
|  1.6  |  GCC/6.4.0  |  N/A  |  ''${APPLIS}/MPI/GCC/6.4.0/OpenMPI/3.0.0/BCFtools/1.6''  |  Debian 9  |
| | **modulefile** : ''GCC/6.4.0/OpenMPI/3.0.0/BCFtools/1.6''  ||||
|  1.3.1  |  gnu 6.3.0  |  N/A  |  /usr/bin/  |  Debian 9  |
| | **modulefile** : **aucun**  ||||


<code bash>APPLIS=/applis/PSMN/debian9/software</code>

Pour utiliser les modulefiles, consulter [[documentation:tools:modules|Environment Modules]]


==== Users documentation ====

   * http://www.htslib.org/doc/bcftools.html


==== Doc Admin-sys PSMN ====

  * http://www.htslib.org/download/
  * https://github.com/samtools/bcftools