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| documentation:examples:modules [2013/03/19 13:06] – effacée ltaulell | documentation:examples:modules [2018/01/05 13:25] – [Usage] ltaulell |
|---|
| | ====== Environment Modules ====== |
| |
| | <note warning>FIXME update needed</note> |
| | |
| | ===== Usage ===== |
| | |
| | * Charger l'environnement du PSMN |
| | <code> |
| | module use /applis/PSMN/Modules |
| | </code> |
| | |
| | * Lister les modules disponibles |
| | <code> |
| | module avail |
| | </code> |
| | |
| | * Charger un module (commande utilisable dans un script) |
| | <code> |
| | module use soft/version |
| | </code> |
| | |
| | |
| | ===== Modules disponibles (Novembre 2014) ===== |
| | |
| | <code> |
| | ~$ module avail |
| | |
| | ---------------------------- /applis/PSMN/Modules ----------------------------- |
| | ADF/2010.02 FastTree/2.1.7 Primer3/2.3.4 |
| | ADF/2012.01 GMAP/2014-10-22 R/2.15.1 |
| | ADF/2013.01 Gaussian/g03-lasim R/3.0.2 |
| | ADF/2013.01.intelmpi Gaussian/g09-chimie RSeQC/2.3.1 |
| | ADF/2013.01.platformmpi Gaussian/g09-geol RSeQC/2.3.3 |
| | Abinit/7.2.1-gnu-4.7.2-x86_64 Gaussian/g09c01-chimie SAMtools/1.1 |
| | Abinit/7.6.4 Gaussian/g09c01-geol Spinevolution/3.4.4 |
| | AllPathsLG/r42874-gnu-4.7.1 Gaussian/g09c01-icbms Spinevolution/3.4.5 |
| | Amber/12-intel-14.0.1-openmp Gaussian/g09d01-chimie Trinity/r2012-06-08 |
| | Amber/12-intel-14.0.1-openmpi-1.6.4 Gaussian/g09d01-geol Trinity/r20140413 |
| | Amber/12-intel-14.0.1-openmpi-1.6.4-K20-DPDP Gaussian/g09d01-icbms Trinity/r20140717 |
| | Amber/12-intel-14.0.1-openmpi-1.6.4-K20-SPFP Gaussian/g09d01-lasim VASP/4.6.36-gnu-4.7.2 |
| | Amber/12-intel-14.0.1-openmpi-1.6.4-M2070-DPDP HTSeq/0.5.3p3 VASP/5.3.2-intel-11.1-debian7 |
| | Amber/12-intel-14.0.1-openmpi-1.6.4-M2070-SPFP HTSeq/0.5.3p9 VASP/5.3.3-gnu-4.7.2 |
| | Amber/12-intel-14.0.1-seq HTSlib/1.1 VASP/5.3.3-intel-14.0.1-debian7 |
| | Amber/12-intel-14.0.1-seq-K20-DPDP Lammps/11Nov13-mpi-1.6.4-intel-14.0.1 VASP/5.3.5-intel-14.0.1-debian7 |
| | Amber/12-intel-14.0.1-seq-K20-SPFP Lammps/28Jun14-mpi-1.6.4-intel-14.0.1 VESTA/3.1.7 |
| | Amber/12-intel-14.0.1-seq-M2070-DPDP MAFFT/7.187 VMD/1.9.1 |
| | Amber/12-intel-14.0.1-seq-M2070-SPFP MIRA/4.0.2 Velvet/1.2.10 |
| | BCFtools/1.1 Matlab/R2011b aTRAM/1.01 |
| | BLAT/35 Molden/5.0.6 fftw/3.3.3-intel-14.0.1 |
| | Base/debian7 Molpro/2010.1-intel-14.0.1 fftw/3.3.3-intel-14.0.1-mpi-1.6.4 |
| | Base/psmn Molpro/2010.1-intel-14.0.1-openmp fftw/3.3.3-intel-14.0.1-openmp |
| | Base/sge MrBayes/3.2.1-intel-mpi intel/11.1.069 |
| | Base/test MrBayes/3.2.1-intel-seq intel/12.0.084 |
| | Bowtie/0.12.7 Oases/0.2.8 intel/14.0.1 |
| | Bowtie/2.0.2 OpenAlea/svn-r4239 modules.psmn |
| | CP2K/2.2.426 ParaView/3.12.0 openmpi/1.4.1-intel-11.1.069 |
| | CP2K/2.5.1 ParaView/4.0.1 openmpi/1.4.5-gnu-4.7.2 |
| | CP2K/2.5.1-complete PhyML/20120412 openmpi/1.5.4-gnu-4.7.2 |
| | CP2K/2.5.1-minimal PhyML/20140223 openmpi/1.5.4-intel-12.0.084 |
| | Cassandra/2.5.4 PhyML/3.0 openmpi/1.6.4-gnu-4.7.2 |
| | Celera/WGS-7.0 Phylobayes/3.3b openmpi/1.6.4-intel-12.0.084 |
| | Corset/1.03 Phylobayes/3.3e openmpi/1.6.4-intel-14.0.1 |
| | |
| | </code> |
