Publications

mardi 2 juillet 2013
par  mechanodevo
popularité : 5%

2017

2016

- F. Kateryna, B. Landrein & O. Hamant*. Interplay between miRNA regulation and mechanical stress for CUC gene expression at the shoot apical meristem. Plant Signal. Behav. 11, e1127497 (2016).

- M. Louveaux, S. Rochette, L. Beauzamy, A. Boudaoud & O. Hamant*. The impact of mechanical compression on cortical microtubules in Arabidopsis : a quantitative pipeline. Plant J. in press (2016).

- L. Hong+, M. Dumond+, S. Tsugawa+, A. Sapala, A.-L. Routier-Kierzkowska, Y. Zhou, C. Chen, A. Kiss, M. Zhu, O. Hamant, R. S. Smith, T. Komatsuzaki, C.-B. Li, A. Boudaoud* & A. H. K. Roeder*. Variable cell growth yields reproducible organ development through spatiotemporal averaging
. Dev. Cell in press (2016).

- M. Louveaux, J.-D. Julien, V. Mirabet, A. Boudaoud* & O. Hamant*. A cell division rule based on tensile stress in Arabidopsis thaliana. Proc. Natl. Acad. Sci. USA in press (2016).

- J Gruel, B Landrein, P Tarr, C Schuster, Y Refahi, A Sampathkumar, O Hamant, EM Meyerowitz and H Jönsson (2016) An epidermis-driven mechanism positions and scales stem cell niches in plants. Sci. Adv. 2 : e1500989 (2016)

- S. Tsugawa, N. Hervieux, O. Hamant, A. Boudaoud, R.S. Smith, C.-B. Li* & T. Komatsuzaki. Extracting subcellular fibrillar alignment with error estimation : Application to microtubules. Biophys. J. 110, 1836–1844 (2016).

- N. Hervieux, M. Dumond, A. Sapala, A.-L. Routier-Kierzkowska, D. Kierzkowski, A. Roeder, R.S. Smith, A. Boudaoud* & O. Hamant*. A mechanical feedback restricts sepal growth and shape in Arabidopsis. Curr Biol. 26, 1019–1028 (2016).

2015

- P. Barbier de Reuille, A.-L. Routier-Kierzkowska, D. Kierzkowski,G.W. Bassel, T. Schüpbach, G. Tauriello, N. Bajpai, S. Strauss, A. Weber, A. Kiss, A. Burian, H. Hofhuis, A. Sapala, M. Lipowczan,M.B. Heimlicher , S. Robinson,E.M. Bayer, K. Basler, P. Koumoutsakos, A.H.K. Roeder, T. Aegerter-Wilmsen, N. Nakayama, M.Tsiantis, A. Hay, D. Kwiatkowska, I. Xenarios, C. Kuhlemeier & R.S. Smith (2015) MorphoGraphX : A platform for quantifying morphogenesis in 4D. eLife 4:e05864, http://dx.doi.org/10.7554/eLife.05864

- B. Landrein, A. Kiss, M. Sassi, A. Chauvet, P. Das, M. Cortizo, P. Laufs, S. Takeda, M. Aida, J. Traas, T. Vernoux, A. Boudaoud & O. Hamant*. Mechanical stress contributes to the expression of the STM homeobox gene in Arabidopsis shoot meristems. eLIFE 4:e07811 (2015).

- L. Beauzamy, M. Louveaux, O. Hamant & A. Boudaoud*. Mechanically, the shoot apical meristem of Arabidopsis behaves like a shell inflated by a pressure of about 1 MPa. Front. Plant Sci. 6,1038 (2015).

- B. Landrein, Y. Refahi, F. Besnard, N. Hervieux, V. Mirabet, A. Boudaoud, T. Vernoux & O. Hamant*. Meristem size contribute to the robustness of phyllotaxis in Arabidopsis. J. Exp. Bot. 66, 1317–1324 (2015).

- F. Boudon, J. Chopard, O. Ali, B. Gilles, O. Hamant, A. Boudaoud, J. Traas* & C. Godin*. A computational framework for 3D mechanical modeling of plant morphogenesis with cellular resolution. PLoS Comput. Biol. 11, e1003950 (2015).

2014

- Sampathkumar, A., Krupinski, P., Wightman, R., Milani, P., Berquand, A., Boudaoud, A., Hamant, O., Jonsson, H., Meyerowitz, E.M. (2014). Sub-cellular and supra-cellular mechanical stress prescribes cytoskeleton behavior in Arabidopsis cotyledon pavement cells. eLife 2014 ;3:e01967 http://dx.doi.org/10.7554/eLife.01967

- Milani, P., Mirabet, V., Cellier, C., Rozier, F., Hamant, O., Das, P., Boudaoud, A. (2014). Matching patterns of gene expression to mechanical stiffness at cell resolution through quantitative tandem epifluorescence and nanoindentation. PLANT PHYSIOLOGY 165, 1399.

- Hamant, O., Das, P. Burian, A. (2014). Time-lapse imaging of developing meristems using confocal laser scanning microscope. METHODS IN MOLECULAR BIOLOGY 1080, 111.

- Boudaoud, A., Burian, A., Borowska-Wykret, D., M., Uyttewaal, M., Wrzalik, R., Kwiatkowska, D and Hamant, O. (2014). FibrilTool, an ImageJ plugin to quantify fibrillar structures in raw microscopy images. NATURE PROTOCOLS 9, 457.

- Landrein B. and Vernoux T. (2014) Auxin, chief architect of the shoot Apex. In Auxin and its role in plant development, Zazimalova et al., eds (Springer-Verlag Wien), pp. 191-212

- Besnard F, Refahi Y, Morin V, Marteaux B, Brunoud G, Chambrier P, Rozier F, Mirabet V, Legrand J, Lainé S, Thévenon E, Farcot E, Cellier C, Das P, Bishopp A, Dumas R, Parcy F, Helariutta Y, Boudaoud A, Godin C, Traas J, Guédon Y, Vernoux T (2014) Cytokinin signalling inhibitory fields provide robustness to phyllotaxis. Nature Jan 16 ;505(7483):417-21.

- Traas J, Sassi M. (2014) Plant development : from biochemistry to biophysics and back. Curr Biol. 24(6):R237-8.

- Sassi M, Ali O, Boudon F, Cloarec G, Abad U, Cellier C, Chen X, Gilles B, Milani P, Friml J, Vernoux T, Godin C, Hamant O, Traas J. (2014) An auxin-mediated shift toward growth isotropy promotes organ formation at the shoot meristem in Arabidopsis. Curr Biol. 24(19):2335-42.

2013

- Landrein, B., Lathe, R., Bringmann, M., Vouillot, C., Ivakov, A., Boudaoud, A., Persson, S., and Hamant, O. (2013). Impaired Cellulose Synthase Guidance Leads to Stem Torsion and Twists Phyllotactic Patterns in Arabidopsis. CURRENT BILOGY 23, 895.

- Hamant, O. (2013). Integrative Cell Biology ; Katanin at the Crossroads. CURRENT BIOLOGY 23, R206.

- de Bossoreille de Ribou, S., Douam, F., Hamant, O., Frohlich, M.W. and Negrutiu I. (2013). Plant science and agricultural productivity : why are we hitting the yield ceiling ? PLANT SCIENCE 210, 159.

- Hamant, O. (2013). Widespread mechanosensing controls the structure behind the architecture in plants. CURRENT OPINION IN PLANT BIOLOGY 16, 654.

- Hamant, O. (2013). Cell Biology : Cytoskeleton Network Topology Feeds Back on Its Regulation. CURRENT BIOLOGY 23, R963.

- Louveaux, M. and Hamant, O. (2013). The mechanics behind cell division. CURRENT OPINION IN PLANT BIOLOGY 16, 774.

- Landrein B, Hamant O. How mechanical stress controls microtubule behavior and morphogenesis in plants : history, experiments and revisited theories. PLANT J. 75, 324-38

- Walker ML, Farcot E, Traas J, Godin C. (2013) The flux-based PIN allocation mechanism can generate either canalyzed or diffuse distribution patterns depending on geometry and boundary conditions. PLoS One. 2013 ;8(1):e54802.

- Traas J. (2013) Phyllotaxis. Development.140(2):249-53. (Review).

- Sassi M, Vernoux T. (2013) Auxin and self-organization at the shoot apical meristem. J Exp Bot. 2013 Jun ;64(9):2579-92. (Review)

- Sassi M, Wang J, Ruberti I, Vernoux T, Xu J. (2013) Shedding light on auxin movement : Light-regulation of polar auxin transport in the photocontrol of plant development. Plant Signal Behav. 18 ;8(3). (Review)

- Mirabet V, Besnard F, Vernoux T, Boudaoud A. (2012) Noise and robustness in phyllotaxis. PLoS Comput Biol. 2012 ;8(2):e1002389.

- Henry A, Monéger F, Samal A, Martin OC. (2013) Network function shapes network structure : the case of the Arabidopsis flower organ specification genetic network. Mol Biosyst. 2013 Jul 4 ;9(7):1726-35.

- Wells DM, Laplaze L, Bennett MJ, Vernoux T. (2013) Biosensors for phytohormone quantification : challenges, solutions, and opportunities. Trends Plant Sci. 18(5):244-9. (Review)

2012

- Alim, K., Hamant, O. and Boudaoud, A. (2012). Regulatory role of cell division rules on tissue growth heterogeneity. FRONTIERS IN PLANT SCIENCES 3,174.

- Bringmann M, Landrein B, Schudoma C, Hamant O, Hauser MT, Persson S. (2012) Cracking the elusive alignment hypothesis : the microtubule-cellulose synthase nexus unraveled. TRENDS PLANT SCI. 17, 666-74

- Sassi M, Lu Y, Zhang Y, Wang J, Dhonukshe P, Blilou I, Dai M, Li J, Gong X, Jaillais Y, Yu X, Traas J, Ruberti I, Wang H, Scheres B, Vernoux T, Xu J. (2012) COP1 mediates the coordination of root and shoot growth by light through modulation of PIN1- and PIN2-dependent auxin transport in Arabidopsis. Development. 2012 Sep ;139(18):3402-12

- Uyttewaal M, Burian A, Alim K, Landrein B, Borowska-Wykręt D, Dedieu A, Peaucelle A, Ludynia M, Traas J, Boudaoud A, Kwiatkowska D, Hamant O. (2012) A katanin-dependent microtubule response to mechanical stress enhances growth gradients between neighboring cells in Arabidopsis. Cell 149, 439-451

- Brunoud G, Wells DM, Oliva M, Larrieu A, Mirabet V, Burrow AH, Beeckman T, Kepinski S, Traas J, Bennett MJ, Vernoux T (2012) A novel sensor to map auxin response and distribution at high spatio-temporal resolution. Nature 482 : 103-106.

- Band LR, Wells DM, Larrieu A, Sun J, Middleton AM, French AP, Brunoud G, Sato EM, Wilson MH, Péret B, Oliva M, Swarup R, Sairanen I, Parry G, Ljung K, Beeckman T, Garibaldi JM, Estelle M, Owen MR, Vissenberg K, Hodgman TC, Pridmore TP, King JR, Vernoux T,* Bennett MJ.* (2012) Root gravitropism is regulated by a transient lateral auxin gradient controlled by a tipping-point mechanism. Proc Natl Acad Sci U S A. 2012 Mar 20 ;109(12):4668-73. (*corr authors)

- Murray JA, Jones A, Godin C, Traas J. (2012) Systems analysis of shoot apical meristem growth and development : integrating hormonal and mechanical signaling. Plant Cell 24 (10):3907-19. (review)

- Middleton AM, Farcot E, Owen MR, Vernoux T. (2012) Modeling regulatory networks to understand plant development : small is beautiful. Plant Cell. 24(10):3876-91. (review)

- Reymond MC, Brunoud G, Chauvet A, Martínez-Garcia JF, Martin-Magniette ML, Monéger F, Scutt CP. (2012) A light-regulated genetic module was recruited to carpel development in Arabidopsis following a structural change to SPATULA. Plant Cell. 2012 Jul ;24(7):2812-25

2011

- Mirabet V, Das P, Boudaoud A, Hamant O. (2011) The role of mechanical forces in plant morphogenesis. Annu Rev Plant Biol. 62:365-85.

- La Rota C, Chopard J, Das P, Paindavoine S, Rozier F, Farcot E, Godin C, Traas J, Monéger F. (2011) A data-driven integrative model of sepal primordium polarity in Arabidopsis. Plant Cell 23(12):4318-33.

- Santuari L, Scacchi E, Rodriguez-Villalon A, Salinas P, Dohmann EM, Brunoud G, Vernoux T, Smith RS, Hardtke CS. (2011) Positional information by differential endocytosis splits auxin response to drive Arabidopsis root meristem growth. Curr Biol. 21(22):1918-23.

- Romanel E, Das P, Amasino RM, Traas J, Meyerowitz E, Alves-Ferreira M. (2011) Reproductive Meristem22 is a unique marker for the early stages of stamen development. Int J Dev Biol. 55(6):657-64.

- Besnard F, Vernoux T, Hamant O (2011) Organogenesis from stem cells in planta : multiple feedback loops integrating molecular and mechanical signals. Cell Mol Life Sci. 68(17):2885-906. (Review).

- Milani P, Gholamirad M, Traas J, Arnéodo A, Boudaoud A, Argoul F, Hamant O. (2011) In vivo analysis of local wall stiffness at the shoot apical meristem in Arabidopsis using atomic force microscopy. Plant J. 67(6):1116-1123.

- Santuari L, Scacchi E, Rodriguez-Villalon A, Salinas P, Dohmann EM, Brunoud G, Vernoux T, Smith RS, Hardtke CS. (2011) Positional information by differential endocytosis splits auxin response to drive Arabidopsis root meristem growth. Curr Biol. 21(22):1918-23.

- Besnard F, Vernoux T, Hamant O (2011) Organogenesis from stem cells in planta : multiple feedback loops integrating molecular and mechanical signals. Cell Mol Life Sci. 68(17) : 2885-906. (Review).

- Vernoux T, Brunoud G, Farcot E, Morin V, Van den Daele H, Legrand J, Oliva M, Das P, Larrieu A, Wells D, Guedon Y, Armitage L, Picard F, Guyomarc’h S, Cellier C, Parry G, Koumproglou R, Doonan JH, Estelle M, Godin C, Kepinski S, Bennett M, De Veylder L, Traas J (2011) The auxin signalling network translates dynamic input into robust patterning at the shoot apex. Mol Syst Biol 7 : 508.

2010

- Heisler MG, Hamant O, Krupinski P, Uyttewaal M, Ohno C, Jönsson H, Traas J, Meyerowitz EM. (2010) Alignment between PIN1 polarity and microtubule orientation in the shoot apical meristem reveals a tight coupling between morphogenesis and auxin transport. PLoS Biol. 8(10):e1000516.

- Hamant O, Traas J, Boudaoud A. (2010) Regulation of shape and patterning in plant development. Curr Opin Genet Dev. 20(4):454-9.

- Cadot O, Touzé C, Boudaoud A. (2010) Linear versus nonlinear response of a forced wave turbulence system. Phys Rev E Stat Nonlin Soft Matter Phys. 82(4 Pt 2):046211.

- Boudaoud A. (2010) An introduction to the mechanics of morphogenesis for plant biologists. Trends Plant Sci. 15(6):353-60.

GIF - 6.4 ko

- Fernandez R, Das P, Mirabet V, Moscardi E, Traas J, Verdeil JL, Malandain G, Godin C. (2010) Imaging plant growth in 4D : robust tissue reconstruction and lineaging at cell resolution. Nat Methods. 7(7):547-53.

- Hamant O, Pautot V. (2010) Plant development : a TALE story. C R Biol. 333(4):371-81.

- Hamant O, Traas J (2010) The mechanics behind plant development – Tansley review. New Phytol.185(2):369-85.

2009

- Uyttewaal M, Traas J, Hamant O (2009) Integrating physical stress, growth, and development. Curr Opin Plant Biol. 13(1):46-52.

GIF - 8.6 ko

- Corson F, Hamant O, Bohn S, Traas J, Boudaoud A, Couder Y (2009). Turning a plant tissue into a living cell froth through isotropic growth. Proc Natl Acad Sci USA 106:8453-8458

- Traas J, Hamant O (2009) From genes to shape : understanding the control of morphogenesis at the shoot meristem in higher plants using systems biology. C R Biol. 332 : 974-985.

- Das, P., Toshiro Ito, Frank Wellmer, Teva Vernoux, Annick Dedieu, Jan Traas, Elliot M. Meyerowitz (2009). Floral stem cell termination involves the direct regulation of AGAMOUS by PERIANTHIA. Development 136, 1605-1611

2008

GIF - 8.8 ko

- Hamant O., Heisler MG., Jonsson H., Krupinski P., Uyttewaal M., Bokov P., Corson F., Sahlin P., Boudaoud A., Meyerowitz EM., Couder Y., Traas J. (2008) Developmental patterning by mechanical signals in Arabidopsis. Science 322 (5908), 1650-1655


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