2019

Flores-Tornero M, Proost S, Mutwil M, Scutt CP, Dresselhaus T, Sprunck S "Transcriptomics of manually isolated Amborella trichopoda egg apparatus cells.". Plant Reproduction 15-27 (2019)
Transcriptomics of manually isolated Amborella trichopoda egg apparatus cells.

Long Y, Boudaoud A "Emergence of robust patterns from local rules during plant development". Current Opinion in Plant Biology 127-137 (2019)
PMID : 30577002

Platre, M.P., Bayle, V., Armengot, L., Bareille, J., Marques-Bueno, M.M., Creff, A., Maneta-Peyret, L., Fiche, J.B., Nolmann, M., Miège, C., Moreau, P., Martinière, A., and Jaillais, Y "Developmental control of plant Rho GTPase nano-organization by the lipid phosphatidylserine.". Science 5 57-62 (2019)
PMID : 30948546

Maugarny-Calès A, Cortizo M, Adroher B, Borrega N, Gonçalves B, Brunoud G, Vernoux T, Arnaud N, Laufs P. "Dissecting the pathways coordinating patterning and growth by plant boundary domains.". PLoS Genetics 1 (2019)
PMID : 30677017

Landrein B, Ingram G. "Connected through the force : Mechanical signals in plant development.". Journal of Experimental Botany (2019)
PMID : 30821332

Doll NM, Gilles LM, Gérentes MF, Richard C, Just J, Fierlej Y, Borrelli VMG, Gendrot G, Ingram GC, Rogowsky PM, Widiez T. "Single and multiple gene knockouts by CRISPR-Cas9 in maize". Plant Cell Reports (2019)
PMID : 30684023

Creff A, Lysiane Brocard L, Joubes J, Taconnat L, Nicolas M Doll, NM, Pascal, S, Roberta Galletti R, Marsollier AC, Moussu S, Widiez T, Domergue F, Ingram GC "A stress-response-related inter-compartmental signalling pathway regulates embryonic cuticle integrity in Arabidopsis". PLOS Genetics (2019)
bioRXiv

Ren, H.*, Willige, B.C., Jaillais, Y., Geng, S., Park, M.Y., Gray, W.M., and Chory, J.* "BRASSINOSTEROID-SIGNALING KINASE 3, a plasma membrane-associated scaffold protein involved in early brassinosteroid signaling". PLoS Genetics 15 (2019)

Martinière, A.F.*#, Fiche, J.B.#; Smokvarska, M.; Mari, S.; Alcon, C.; Dumont, X.; Hematy, K.; Jaillais, Y.; Nollmann, M.; Maurel, C "Osmotic stress activates two ROS pathways with distinct impacts on protein nanodomains and diffusion. ". Plant Physiology in press (2019)

Durand, T.C., Cueff, G., Godin, B., Valot, B., Clement, G., Gaude, T.*, and Rajjou, L*. "Combined Proteomic and Metabolomic Profiling of the Arabidopsis thaliana vps29 Mutant Reveals Pleiotropic Functions of the Retromer in Seed Development.". Int J Mol Sci (2019)

Laura Lorenzo-Orts, Witthoeft, J.; Deforges, J.; Martinez, J.; Loubéry, S.; Placzek, A.; Poirier, Y.; Hothorn, L.A.; Jaillais, Y.; Hothorn, M*. "Concerted expression of a cell-cycle regulator and a metabolic enzyme from a bicistronic transcript in plants. ". Nature Plants in press (2019)

Fruleux A, Boudaoud A. "Modulation of tissue growth heterogeneity by responses to mechanical stress.". Proc Natl Acad Sci U S A 16 1940-1945 (2019)
PMID : 30674660

2018

Moody LA, Kelly S, Coudert Y, Nimchuk ZL, Harrison CJ, Langdale JA. "Somatic hybridization provides segregating populations for the identification of causative mutations in sterile mutants of the moss Physcomitrella patens.". New Phytologist 3 (2018)
PMID : 29498048

Ingram G, North H, Lepiniec L. "Seeds as perfect factories for developing sustainable agriculture". Plant Reproduction https://doi.org/10.1007/s00497-018-0340-7 (2018)
PMID : 29934741

Marsollier AC, Ingram G. "Getting physical : invasive growth events during plant development.". Curr Opin Plant Biol. (2018)
PMID : 29981931

Bouyer D., Heese M., Chen P., Harashima H., Roudier F., Grüttner C, and Schnittger A. "Genome-wide identification of RETINOBLASTOMA RELATED 1 binding sites in Arabidopsis reveals novel DNA damage regulators.". PLoS Genet 14:e1007797; DOI:10.1371/journal.pgen.1007797 (2018)
PMID:30500810

Fruleux A, Boudaoud A "Modulation of tissue growth heterogeneity by responses to mechanical stress". bioRXiv (2018)
https://doi.org/10.1101/425355

S. Verger, Y. Long, A. Boudaoud & O. Hamant* "A tension-adhesion feedback loop in plant epidermis". eLIFE 7 e34460 (2018)
PMID : 29683428

Lopez-Obando M, de Villiers R, Hoffmann B, Ma L, de Saint Germain A, Kossmann J, Coudert Y, Harrison CJ, Rameau C, Hills P, Bonhomme S. "Physcomitrella patens MAX2 characterization suggests an ancient role for this F-box protein in photomorphogenesis rather than strigolactone signalling". New Phytologist 2 (2018)
PMID : 29781136

Stigliani A, Martin-Arevalillo R, Lucas J, Bessy A, Vinos-Poyo T, Mironova V, Vernoux T, Dumas R, Parcy F. "Capturing Auxin Response Factors Syntax Using DNA Binding Models". Molecular Plant Cell Press (2018)
PMID : 30336329

J.-D. Julien & A. Boudaoud* "Elongation and shape changes in organisms with cell walls : a dialogue between experiments and models". The Cell Surface 1 34–42 (2018)

Raymond O, Gouzy J, Just J, Badouin H, Verdenaud M, Lemainque A, Vergne P, Moja S, Choisne N, Pont C, Carrère S, Caissard JC, Couloux A, Cottret L, Aury JM, Szécsi J, Latrasse D, Madoui MA, François L, Fu X, Yang SH, Dubois A, Piola F, Larrieu A, Perez M, Labadie K, Perrier L, Govetto B, Labrousse Y, Villand P, Bardoux C, Boltz V, Lopez-Roques C, Heitzler P, Vernoux T, Vandenbussche M, Quesneville H, Boualem A, Bendahmane A, Liu C, Le Bris M, Salse J, Baudino S, Benhamed M, Wincker P, Bendahmane M. "The Rosa genome provides new insights into the domestication of modern roses.". Nature Genetics 6 772-777 (2018)
PMID : 29713014

Orosa-Puente B, Leftley N, von Wangenheim D, Banda J, Srivastava AK, Hill K, Truskina J, Bhosale R, Morris E, Srivastava M, Kümpers B, Goh T, Fukaki H, Vermeer JEM, Vernoux T, Dinneny JR, French AP, Bishopp A, Sadanandom A, Bennett MJ. "Root branching toward water involves posttranslational modification of transcription factor ARF7.". Science 6421 1407-1410 (2018)
PMID : 30573626

Armezzani A, Abad U, Ali O, Andres Robin A, Vachez L, Larrieu A, Mellerowicz EJ, Taconnat L, Battu V, Stanislas T, Liu M, Vernoux T, Traas J, Sassi M. "Transcriptional induction of cell wall remodelling genes is coupled to microtubule-driven growth isotropy at the shoot apex in Arabidopsis.". Development (2018)
PMID : 29739839

Shin JH, Mila I, Liu M, Rodrigues MA, Vernoux T, Pirrello J, Bouzayen M. "The RIN-regulated Small Auxin-Up RNA SAUR69 is involved in the unripe-to-ripe phase transition of tomato fruit via enhancement of the sensitivity to ethylene.". New Phytologist 820-836 (2018)
PMID : 30511456

Bhosale R, Giri J, Pandey BK, Giehl RFH, Hartmann A, Traini R, Truskina J, Leftley N, Hanlon M, Swarup K, Rashed A, Voß U, Alonso J, Stepanova A, Yun J, Ljung K, Brown KM, Lynch JP, Dolan L, Vernoux T, Bishopp A, Wells D, von Wirén N, Bennett MJ, Swarup R. "A mechanistic framework for auxin dependent Arabidopsis root hair elongation to low external phosphate.". Nature Communications (2018)
PMID : 29651114

Lang D, Ullrich KK, Murat F, Fuchs J, Jenkins J, Haas FB, Piednoel M, Gundlach H, Van Bel M, Vives Cobo, Morata J, Symeonidi A, Hiss M, Meyberg R, Muchero W, Kamisugi Y, Saleh O, Blanc G, Decker EL, van Gessel N, Grimwood J, Hayes R, Graham SW, Gunter LE, McDaniel S, Hoernstein SNW, Larsson A, Li FW, Phillips J, Ranjan P, Rokshar DS, Rothfels CJ, Schneider L, Shu S, Stevenson DW, Thümmler F, Tillich M, Villarreal JCA, Widiez T, Wong GKS, Wymore A, Zhang Y, Zimmer AD, Quatrano RS, Mayer KFX, Goodstein D, Casacuberta JM, Vandepoele K, Reski R, Cuming AC, Tuskan J, Maumus F, Salse J, Schmutz J, Rensing SA. "The P. patens chromosome-scale assembly reveals moss genome structure and evolution". Plant Journal (2018)
PMID : 29237241

V. Mirabet*, P. Krupinski, O. Hamant, E.M. Meyerowitz, H. Jönsson & A. Boudaoud.* "The self-organization of plant microtubules inside the cell volume yields their cortical localization, stable alignment, and sensitivity to external cues". PLoS Comput. Biol. 14 e1006011 (2018)
PMID : 29462151

Darracq A, Vitte C, Nicolas S, Duarte J, Pichon JP, Mary-Huard T, Chevalier C, Bérard A, Le Paslier MC, Rogowsky P, Charcosset A, Joets J. "Sequence analysis of European maize inbred line F2 provides new insights into molecular and chromosomal characteristics of presence/absence variants". BMC Genomics. (2018)
PMID : 29402214

Morao A. K., Caillieux E., Vincent Colot V. and Roudier F. "Cell type-specific profiling of chromatin modifications and associated proteins". Methods Mol Biol. 1675 111-130 Springer NY, Edited by Marian Bemer and Célia Baroux (2018)
PMID:29052189

L. Hong#, M. Dumond#, M. Zhu, S. Tsugawa, C.-B. Li, A. Boudaoud, O. Hamant & A.H.K. Roeder* "Heterogeneity and Robustness in Plant Morphogenesis : From Cells to Organs". Annual Reviews of Plant Biology 69 469–495 (2018)
PMID : 29505739

"Cortijo S., Charoensawan V., Roudier F. and...". (2018)
Cortijo S., Charoensawan V., Roudier F. and Wigge P.A. (2018). Chromatin Immunoprecipitation Sequencing (ChIP-Seq) for Transcription Factors and Chromatin Factors in Arabidopsis thaliana Roots : From Material Collection to Data Analysis. Methods Mol Biol., In book : "Root Development : Methods and Protocols" Clifton NJ, Edited by Daniela Ristova and Elke Barbez, 1761:231-248. PMID:29525962

"Bellegarde F., Herbert L., Séré D., Caillieux...". (2018)
Bellegarde F., Herbert L., Séré D., Caillieux E., Boucherez J., Fizames C., Roudier F., Gojon A. and Martin A. (2018). Polycomb Repressive Complex 2 attenuates the very high expression of the Arabidopsis gene NRT2.1. Scientific Reports, 8:7905 ; DOI:10.1038/s41598-018-26349-w. PMID:29784958

Scutt CP "The origin of angiosperms". Evolutionary Developmental Biology Nuno de la Rosa L, Muller G (2018)

"Raymond O, Gouzy J, Just J, Badouin H,...". (2018)
Raymond O, Gouzy J, Just J, Badouin H, Verdenaud M, Lemainque A, Vergne P, Moja S, Choisne N, Pont C, Carrère S, Caissard JC, Couloux A, Cottret L, Aury JM, Szécsi J, Latrasse D, Madoui MA, François L, Fu X, Yang SH, Dubois A, Piola F, Larrieu A, Perez M, Labadie K, Perrier L, Govetto B, Labrousse Y, Villand P, Bardoux C, Boltz V, Lopez-Roques C, Heitzler P, Vernoux T, Vandenbussche M, Quesneville H, Boualem A, Bendahmane A, Liu C, Le Bris M, Salse J, Baudino S, Benhamed M, Wincker P, Bendahmane M. (2018). The Rosa genome provides new insights into the domestication of modern roses. Nature Genetics (epub ahead of print) doi : 10.1038/s41588-018-0110-3.

"Haworth M, Scutt CP, Douthe C, Marino G,...". (2018)
Haworth M, Scutt CP, Douthe C, Marino G, Gaudio Gomes MT, Loreto F, Flexas J, Centritto M (2018). Allocation of the epidermis to stomata relates to stomatal physiological control : Stomatal factors involved in the evolutionary diversification of the angiosperms and development of amphistomaty. Environmental and Experimental Botany 151 : 55–63

Eriksson D, Harwood W, Hofvander P, Jones H, Rogowsky P, Stöger E, Visser RGF. "A Welcome Proposal to Amend the GMO Legislation of the EU". Trends in Biotechnology in press Elsevier (2018)
PMID : 29807731

Ingram G, Davidson L. "Editorial : Developmental mechanisms, patterning and evolution (2018)". Curr Opin Genet Dev (2018)
PMID : 30501872

"Platre MP, Noack LC, Doumane M, Bayle V,...". (2018)
Stanislas, T., Platre, M. P., Liu, M., Rambaud-Lavigne, L. E., Jaillais, Y., & Hamant, O. (2018). A phosphoinositide map at the shoot apical meristem in Arabidopsis thaliana. BMC biology, 16(1), 20.

"Platre MP, Noack LC, Doumane M, Bayle V,...". (2018)
Platre MP, Noack LC, Doumane M, Bayle V, Simon MLA, Maneta-Peyret L, Fouillen L, Stanislas T, Caillaud MC, Potocky M, Copic A, Moreau P and Jaillais Y#. 2018. A combinatorial lipid code shapes the electrostatic landscape of plant endomembranes. (2018). Developmental Cell, 21 ;45(5):645-480.e11.


V. Davì, H. Tanimoto, D. Ershov, A. Haupt, H. De Belly, R. Le Borgne, E. Couturier, A. Boudaoud* & Nicolas Minc* "Mechanosensation dynamically coordinates polar growth and cell wall assembly to promote survival". Dev. Cell 45 170–182 (2018)
PMID : 29689193

Malivert A, Hamant O, Ingram G. "The contribution of mechanosensing to epidermal cell fate specification.". Curr Opin Genet Dev. (2018)
PMID : 30006098

Amélie Andres-Robin, Mathieu Reymond, Antoine Dupire, Virginie Battu, Nelly Dubrulle, Grégory Mouille, Valérie Lefebvre, Jerome Pelloux, Arezki Boudaoud, Jan Traas, Charles Patrick Scutt, Françoise Monéger "Evidence for the control of Arabidopsis gynoecium morphogenesis by ETTIN via cell wall dynamics". Plant Physiology American Society of Plant Biologists (2018)
PMID : 30237208

Singh AP, Fridman Y, Holland N, Ackerman-Lavert M, Zananiri R, Jaillais Y, Henn A, Savaldi-Goldstein S. "Interdependent Nutrient Availability and Steroid Hormone Signals Facilitate Root Growth Plasticity.". Developmental Cell 1 58-72 (2018)

Borrelli VMG, Brambilla V, Rogowsky P, Marocco A, Lanubile A. "The Enhancement of Plant Disease Resistance Using CRISPR/Cas9 Technology". Frontiers in Plant Science (2018)
PMID : 30197654

Morel, P., Heijmans, K., Ament, K., Chopy, M., Trehin, C., Chambrier, P., Rodrigues Bento, S., Bimbo, A., and Vandenbussche, M. "The Floral C-Lineage Genes Trigger Nectary Development in Petunia and Arabidopsis. ". Plant Cell 30 2020-2037 (2018)
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Francois, L., Verdenaud, M., Fu, X., Ruleman, D., Dubois, A., Vandenbussche, M., Bendahmane, A., Raymond, O., Just, J., and Bendahmane, M. "A miR172 target-deficient AP2-like gene correlates with the double flower phenotype in roses.". Sci Rep 8 12912 (2018)
URL

Coenen, H., Viaene, T., Vandenbussche, M., and Geuten, K. "TM8 represses developmental timing in Nicotiana benthamiana and has functionally diversified in angiosperms.". BMC Plant Biol 129 (2018)
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Chopy M., Morel P., Costanzo E., Rodrigues Bento S., Chambrier P., Vandenbussche M. "The Genetic Basis of Floral Organ Identity and Its Applications in Ornamental Plant Breeding.". Ornamental Crops. Handbook of Plant Breeding Van Huylenbroeck J. (2018)
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Coenen, H., Viaene, T., Vandenbussche, M., and Geuten, K. "TM8 represses developmental timing in Nicotiana benthamiana and has functionally diversified in angiosperms. ". BMC Plant Biol 129 (2018)
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Arnault G, Vialette ACM, Andres-Robin A, Fogliani B, Gâteblé G, Scutt CP "Evidence for the Extensive Conservation of Mechanisms of Ovule Integument Development Since the Most Recent Common Ancestor of Living Angiosperms". Frontiers in Plant Science 1352 (2018)
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de Bossoreille S, Morel P, Trehin C, Negrutiu I "REBELOTE, a regulator of floral determinacy in Arabidopsis thaliana, interacts with both nucleolar and nucleoplasmic proteins". FEBS Open Bio 1636–1648 (2018)
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Negrutiu I, Hamant O "Anthropocène". In : Dictionnaire juridique des transitions écologiques. 104-107 eds: François Collart Dutilleul, Valérie Pironon, Agathe Van Lang (2018)

Couvet D, Negrutiu I "Ecosystèmes". In : Dictionnaire juridique des transitions écologiques. 358-361 eds: François Collart Dutilleul, Valérie Pironon, Agathe Van Lang (2018)

Arguello J, Negrutiu I, Weber JL "Evaluations environnementales". In: Dictionnaire juridique des transitions écologiques. 387-391 eds: François Collart Dutilleul, Valérie Pironon, Agathe Van Lang (2018)

Malwe C, Fernandez E, Negrutiu I "Ressources naturelles". In: Dictionnaire juridique des transitions écologiques. 698-702 eds: François Collart Dutilleul, Valérie Pironon, Agathe Van Lang (2018)

Acunzo D, Escher G, Ottersen OP, Whittington J, Gillet Ph, Stenseth N, Negrutiu I "Framing planetary health : Arguing for resource-centred science.". Lancet Planetary Health e101-e102 (2018)

Monniaux M, Vandenbussche M "How to Evolve a Perianth : A Review of Cadastral Mechanisms for Perianth Identity.". Frontiers in Plant Science 1573 (2018)
How to Evolve a Perianth : A Review of Cadastral Mechanisms for Perianth Identity.

Monniaux M, Pieper B, McKim SM, Routier-Kierzkowska AL, Kierzkowski D, Smith RS, Hay A "The role of APETALA1 in petal number robustness.". Elife (2018)
The role of APETALA1 in petal number robustness.

Bernillon S, Maucourt M, Chéreau S, Deborde C, Jacob D, Priymenko N, Laporte B, Coumoul X, Salles B, Rogowsky PM, Richard-Forget F, Moing A " Characterization of GMO or glyphosate effects on the composition of maize grain and maize-based diet for rat feeding". Metabolomics (2018)
Link

Rogowsky PM " CRISPR-Cas technology in plant science.". Potato Research (2018)
Link

Youssef D, Nihou A, Partier A, Tassy C, Paul W, Rogowsky PM, Beckert M and Barret P "Induction of targeted deletions in transgenic bread wheat (Triticum aestivum L.) using customised meganuclease". Plant Mol Biol Rep (2018)
Link

Chereau S, Rogowsky P, Laporte B, Coumoul X, Moing A, Priymenko N, Steinberg P, Wilhelm R, Schiemann J, Salles B, F. Richard-Forget F "Rat feeding trials : A comprehensive assessment of contaminants in both genetically modified maize and resulting pellets.". Food and Chemical Toxicology (2018)
PMID : 30253247

Reeb C, Kaandorp J, Jansson F, Puillandre N, Dubuisson JY, Cornette R, Jabbour F, Coudert Y, Patiño J, Flot JF, Vanderpoorten A. "Quantification of complex modular architecture in plants". New Phytologist 2 (2018)
PMID : 29468683

2017

P. Durand-Smet, E. Gauquelin, N. Chastrette, A. Boudaoud & A. Asnacios*. "Estimation of turgor pressure through comparison between single plant cell and pressurized shell mechanics. ". Physical Biol 14, 055002 (2017)
https://doi.org/10.1186/s13007-017-0264-5.

S. Tsugawa, N. Hervieux, D. Kierzkowski, A.-L. Routier-Kierzkowska, A. Sapala, O. Hamant, R. S. Smith, A. H. K. Roeder, A. Boudaoud & C.-B. Li*. "Clones of cells switch from reduction to enhancement of size variability in Arabidopsis sepals.". Development. 144 4398-4405 (2017)
PMID : 29183944

J. Chlasta, P. Milani, G. Runel, J.-L. Duteyrat, L. Arias, L.-A. Lamiré, A. Boudaoud & M. Grammont* "Variations in basement membrane mechanics are linked to epithelial morphogenesis". Development 144 4350–4362 (2017)
PMID : 29038305

Hervieux N, Tsugawa S, Fruleux A, Dumond M, Routier-Kierzkowska AL, Komatsuzaki T, Boudaoud A, Larkin JC, Smith RS, Li CB, Hamant O. "Mechanical shielding of rapidly growing cell buffers growth heterogeneity and contributes to organ shape reproducibility.". Curr Biol. 27 3468-3479.e4 (2017)
PMID : 29129534

"Prunet N, W Yang, P Das, EM Meyerowitz and TP...". (2017)
Prunet N, W Yang, P Das, EM Meyerowitz and TP Jack. SUPERMAN prevents class B gene expression and promotes stem cell termination in the fourth whorl of Arabidopsis thaliana flowers. PNAS 114 : 7166 (2017).

A.Kiss, T.Moreau, V. Mirabet, C. I.Calugaru, A. Boudaoud, P. Das "Segmentation of 3D images of plant tissues at multiple scales using the level set method". Plant Methods 13 (2017)
PMID : 29296118

"Ingram GC. Dying to live : cell elimination as...". (2017)
Ingram GC.
Dying to live : cell elimination as a developmental strategy in angiosperm seeds.
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"Meyer HM, Teles J, Formosa-Jordan P, Refahi...". (2017)
Meyer HM, Teles J, Formosa-Jordan P, Refahi Y, San-Bento R, Ingram G, Jönsson H, Locke JC, Roeder AH.
Fluctuations of the transcription factor ATML1 generate the pattern of giant cells in the Arabidopsis sepal
Elife. 2017 [PMID : 28145865]

"Doll MN, Depège-Fargeix N, Rogowsky PM, Widiez...". (2017)
Doll MN, Depège-Fargeix N, Rogowsky PM, Widiez T.
Signaling in early maize kernel development
Molecular Plant. 2017 [PMID : 28267956]

"Gilles LM, Khaled A, Laffaire JB, Chaignon S,...". (2017)
Gilles LM, Khaled A, Laffaire JB, Chaignon S, Gendrot G, Laplaige J, Bergès H, Beydon G, Bayle V, Barret P, Comadran J, Martinant JP, Rogowsky PM, Widiez T.
Loss of pollen-specific phospholipase NOT LIKE DAD triggers gynogenesis in maize
EMBO J. 2017 [PMID : 28228439]
Featured in EMBO J ; INRA ; CNRS ; ENS de Lyon

"Amanda D, Doblin MS, Galletti R, Bacic A,...". (2017)
Amanda D, Doblin MS, Galletti R, Bacic A, Ingram GC, Johnson KL
Regulation of Cell Wall Genes in Response to DEFECTIVE KERNEL1 (DEK1)-Induced Cell Wall Changes.
Plant Signal Behav [PMID : 28692330]

"Moussu SA, Doll NM, Chamot S, Brocard L,...". (2017)
Moussu SA, Doll NM, Chamot S, Brocard L, Creff A, Fourquin C, Widiez T, Nimchuk ZL, Ingram GC.
ZHOUPI and KERBEROS Mediate Embryo/Endosperm Separation by Promoting the Formation of an Extra-Cuticular Sheath at the Embryo Eurface.
Plant Cell [PMID : 28696222]


"Ingram G, Nawrath C. The roles of the cuticle...". (2017)
Ingram G, Nawrath C. The roles of the cuticle in plant development : organ adhesions and beyond. J Exp Bot. [PMID : 28992283]

"Tran D, Galletti R, Neumann ED, Dubois A,...". (2017)
Tran D, Galletti R, Neumann ED, Dubois A, Sharif-Naeini R, Geitmann A, Frachisse JM, Hamant O, Ingram GC A mechanosensitive Ca2+ channel activity is dependent on the developmental regulator DEK1. Nat Commun. [PMID : 29044106]

"Gilles LM, Martinant JP, Rogowsky PM, Widiez...". (2017)
Gilles LM, Martinant JP, Rogowsky PM, Widiez T. Haploid induction in plants. Current Biology [PMID : 29065285]

"Widiez, T., Ingram, G. C. & Gutierrez-Marcos,...". (2017)
Widiez, T., Ingram, G. C. & Gutierrez-Marcos, J. Embryo-Endosperm-Sporophyte Interaction in Maize Seeds. in Maize Kernel Development 95–107 (Brian A. Larkins, 2017). [Link to the book]

"Amanda D, Doblin MS, MacMillan CP, Galletti...". (2017)
Amanda D, Doblin MS, MacMillan CP, Galletti R, Golz JF, Bacic A, Ingram GC, Johnson KL. Arabidopsis DEFECTIVE KERNEL1 regulates cell wall composition and axial growth in the inflorescence stem. Plant Direct [Link]

"Youssef D, Nihou A, Partier A, Tassy C, Paul...". (2017)
Youssef D, Nihou A, Partier A, Tassy C, Paul W, Rogowsky PM, Beckert M and Barret P. Induction of targeted deletions in transgenic bread wheat (Triticum aestivum L.) using customised meganuclease.
Plant Mol Biol Rep [Link to]

"Birnbaum, K. D. and Roudier, F. (2017)....". (2017)
Birnbaum, K. D. and Roudier, F. (2017). Epigenetic memory and cell fate reprogramming in plants. Regeneration 4:15–20.PMID:28316791

"Rosspopoff O., Chelysheva L., Saffar J.,...". (2017)
Rosspopoff O., Chelysheva L., Saffar J., Lecorgne L., Gey D., Caillieux C, Vincent Colot, Roudier F., Hilson P., Berthome R., Da Costa M. and Rech P. (2017). Direct conversion of root primordium into shoot meristem relies on timing of stem cell niche development. Development 144:1187-1200. PMID:28174250

"Bouyer D., Kramdi A., Kassam M., Heese M.,...". (2017)
Bouyer D., Kramdi A., Kassam M., Heese M., Schnittger A., Roudier F. and Colot V. (2017). DNA methylation dynamics during early plant life. Genome Biol. 18:179. PMID:28942733

"Tran D., Galletti R., Neumann E.D., Dubois...". (2017)
Tran D., Galletti R., Neumann E.D., Dubois A., Sharif-Naeini R., Geitmann A., Frachisse J-M., Hamant O., Ingram G.C. (2017). A mechanosensitive Ca(2+) channel activity is dependent on the developmental regulator DEK1. Nat Commun. 18:1009. PMID:29044106

"Chica C., Louis A., Roest Crollius H., Colot...". (2017)
Chica C., Louis A., Roest Crollius H., Colot V.# and Roudier F.# (2017). Comparative epigenomics in the Brassicaceae reveals two evolutionarily conserved modes of PRC2-mediated gene regulation. Genome Biol. 18:207. #Co-corresponding authors. PMID:29084582

"Moyroud E, Monniaux M, Thevenon E, Dumas R,...". (2017)
Moyroud E, Monniaux M, Thevenon E, Dumas R, Scutt CP, Frohlich MW, Parcy F (2017). A link between LEAFY and B-gene homologues in Welwitschia mirabilis sheds light on ancestral mechanisms prefiguring floral development. New Phytologist (Epub ahead of print) : DOI : 10.1111/nph.14483

"Morel P, Heijmans K, Rozier F, Zethof J,...". (2017)
Morel P, Heijmans K, Rozier F, Zethof J, Chamot S, Rodrigues Bento S, Vialette-Guiraud A, Chambrier P, Trehin C, Vandenbussche M (2017). Divergence of the floral A-function between an asterid and a rosid species. The Plant Cell 29 : 1605-1621.




"Fogliani B, Gateble G, Villegente M, Fabre I,...". (2017)
Fogliani B, Gateble G, Villegente M, Fabre I, Klein N, Anger N, Baskin CC, Scutt CP (2017). The morphophysiological dormancy in Amborella trichopoda seeds is a pleisiomorphic trait in angiosperms. Annals of Botany 119:581-590.

"Anger N, Fogliani B, Scutt CP, Gateble G...". (2017)
Anger N, Fogliani B, Scutt CP, Gateble G (2017). Dioecy in Amborella trichopoda : evidence for genetically based sex determination and its consequences for inferences of the breeding system in early angiosperms. Annals of Botany 119 : 591-597.


"González-Carranza ZH, Peters JL, Zhang X,...". (2017)
González-Carranza ZH, Peters JL, Zhang X, Boltz V, Szecsi J, Bendahmane M, Roberts JA. HAWAIIAN SKIRT controls floral organ number and size in Arabidopsis by altering transcript levels of CUC1 and CUC2 via miR164. PLoS ONE 12(9) : e0185106.

"Kong W, Yang S, Wang Y, Bendahmane M, Fu X....". (2017)
Kong W, Yang S, Wang Y, Bendahmane M, Fu X. (2017) Genome-wide identification and characterization of aquaporin gene family in Beta vulgaris. PeerJ 5:e3747 https://doi.org/10.7717/peerj.3747

"Zhang X, Jayaweera D, Peters JL, Szecsi J,...". (2017)
Zhang X, Jayaweera D, Peters JL, Szecsi J, Bendahmane M, Roberts J, González-Carranza ZH. The Arabidopsis thaliana F-box gene HAWAIIAN SKIRT is a new player in the microRNA pathway. PLoSONE in press)

"Betsch L, Savarin J, Bendahmane M*, Szecsi J*...". (2017)
Betsch L, Savarin J, Bendahmane M*, Szecsi J* (2017) Roles of the Translationally Controlled Tumor Protein (TCTP) in Plant Development. In TCTP/tpt1 - Remodeling Signaling from Stem Cell to Disease, Vol 64. Ed. A. Telerman, R. Amson. Nature Springer publishing pp149-172.* Co-corresponding authors

"Matthieu P. Platre and Yvon Jaillais#....". (2017)
Matthieu P. Platre and Yvon Jaillais#. Anionic Lipids and the Maintenance of Membrane Electrostatics in Eukaryotes. Plant Signal Behav. 2017 Jan 19:0. doi : 0.1080/15592324.2017.1282022.

"Martins S, Vert G, Jaillais Y#. Probing...". (2017)
Martins S, Vert G, Jaillais Y#. Probing Activation and Deactivation of the BRASSINOSTEROID INSENSITIVE1 Receptor Kinase by Immunoprecipitation.Methods Mol Biol. 2017 ;1564:169-180. doi : 10.1007/978-1-4939-6813-8_14.

"Bayle V, Platre MP, Jaillais Y#. Automatic...". (2017)
Bayle V, Platre MP, Jaillais Y#. Automatic Quantification of the Number of Intracellular Compartments in Arabidopsis thaliana Root Cells. Bio Protoc. 2017 Feb 20 ;7(4). pii : e2145. doi : 10.21769/BioProtoc.2145.

"Doumane M*, Lionnet C*, Bayle V, Jaillais Y,...". (2017)
Doumane M*, Lionnet C*, Bayle V, Jaillais Y, Caillaud MC#. Automated Tracking of Root for Confocal Time-lapse Imaging of Cellular Processes. Bio Protoc. 2017 Apr 20 ;7(8). pii : e2245. doi : 10.21769/BioProtoc.2245. PMID : 28459086

"Noack LC, Jaillais Y#. Precision targeting by...". (2017)
Noack LC, Jaillais Y#. Precision targeting by phosphoinositides : how PIs direct endomembrane trafficking in plants. Curr Opin Plant Biol. 2017 Jul 19 ;40:22-33. doi : 10.1016/j.pbi.2017.06.017. Review. PMID : 28734137

"Gronnier J, Crowet JM, Habenstein B, Nasir...". (2017)
Gronnier J, Crowet JM, Habenstein B, Nasir MN, Bayle V, Hosy E, Platre MP, Gouguet P, Raffaele S, Martinez D, Grelard A, Loquet A, Simon-Plas F, Gerbeau-Pissot P, Der C, Bayer EM, Jaillais Y, Deleu M, Germain V, Lins L, Mongrand S. Structural basis for plant plasma membrane protein dynamics and organization into functional nanodomains. Elife. 2017 Jul 31 ;6. pii : e26404. doi : 10.755 4/eLife.2604. PMID : 28758890

Besnard, F., Koutsovoulos, G., Dieudonné, S., Blaxter, M., and Félix, M.-A. "Toward Universal Forward Genetics : Using a Draft Genome Sequence of the Nematode Oscheius tipulae To Identify Mutations Affecting Vulva Development.". Genetics 206, 1747–1761. (2017)
https://doi.org/10.1534/genetics.117.203521

Vernoux T & Robert S "Auxin 2016 : A burst of auxin in the warmth south of China". Development 533-540 (2017)
https://doi.org/10.1242/dev.144790

Martin-Arevalillo R, Nanao MH, Larrieu A, Vinos-Poyo T, Mast D, Galvan-Ampudia C, Brunoud G, Vernoux T, Dumas R, Parcy F. "The structure of the Arabidopsis TOPLESS corepressor provides insight into the evolution of transcriptional repression". Proceedings of the National Academy of Sciences 30 8107-8112 (2017)
PMID : 28698367

Coudert Y, Bell NE, Edelin C & Harrison CJ "Multiple innovations underpinned branching form diversification in mosses". New Phytologist 2 840-850 (2017)
PMID : 28470778

Truskina J, Vernoux T "The growth of a stable stationary structure : coordinating cell behavior and patterning at the shoot apical meristem". Current Opinion in Plant Biology 41 83-88 (2017)
https://doi.org/10.1016/j.pbi.2017....

Coudert Y. "The evolution of branching in land plants : between conservation and diversity". Evolutionary Developmental Biology. Springer, Cham (2017)
http://doi.org/10.1007/978-3-319-33...

2016

Bar-Sinai Y, Julien JD, Sharon E, Armon S, Nakayama N, Adda-Bedia M, Boudaoud A. "Mechanical Stress Induces Remodeling of Vascular Networks in Growing Leaves.". PLoS Comput Biol. 12 (2016)
PMID : 27074136

N. Hervieux, M. Dumond, A. Sapala, A.-L. Routier-Kierzkowska, D. Kierzkowski, A. Roeder, R.S. Smith, A. Boudaoud* & O. Hamant* "A mechanical feedback restricts sepal growth and shape in Arabidopsis". Curr Biol. 26 1019–1028 (2016)
PMID : 27151660

Tsugawa S, Hervieux N, Hamant O, Boudaoud A, Smith RS, Li CB, Komatsuzaki T. "Extracting subcellular fibrillar alignment with error estimation : Application to microtubules.". Biophys J. 110 1836-1844 (2016)
PMID : 27119643

Hong L, Dumond M, Tsugawa S, Sapala A, Routier-Kierzkowska AL, Zhou Y, Chen C, Kiss A, Zhu M, Hamant O, Smith RS, Komatsuzaki T, Li CB, Boudaoud A, Roeder AH. "Variable cell growth yields reproducible organ development through spatiotemporal averaging
.". Dev Cell. 38 15-32 (2016)
PMID : 27404356

Fourquin C, Beauzamy L, Chamot S, Creff A, Goodrich J, Boudaoud A, Ingram G. "Mechanical stress mediated by both endosperm softening and embryo growth underlies endosperm elimination in Arabidopsis seeds.". Development. 143 3300-5 (2016)
PMID : 27287798

Louveaux M, Rochette S, Beauzamy L, Boudaoud A, Hamant O. "The impact of mechanical compression on cortical microtubules in Arabidopsis : a quantitative pipeline.". Plant J. 88 328-342 (2016)
PMID : 27482848

E. Biot+, M. Cortizo+, J. Burguet+*, A. Kiss+, M. Oughou, A. Maugarny-Calès, B. Gonçalves, B. Adroher, P. Andrey, A. Boudaoud* & P. Laufs*. "Multiscale quantification of morphodynamics : MorphoLeaf software for 2D shape analysis. ". Development 143 3417-28 (2016)
PMID : 27387872

"F. Kateryna, B. Landrein & O. Hamant*....". (2016)
F. Kateryna, B. Landrein & O. Hamant*. Interplay between miRNA regulation and mechanical stress for CUC gene expression at the shoot apical meristem. Plant Signal. Behav. 11, e1127497 (2016).

Alim K, Armon S, Shraiman BI, Boudaoud A. "Leaf growth is conformal.". Phys Biol. 13 (2016)
PMID : 27597439

R. Malgat, F. Faure & A. Boudaoud* "A mechanical model to interpret cell-scale indentation experiments on plant tissues in terms of cell wall elasticity and turgor pressure.". Front Plant Sci. 7 1351 (2016)
PMID : 27656191

Ezquer I, Mizzotti C, Nguema-Ona E, Gotté M, Beauzamy L, Viana VE, Dubrulle N, Costa de Oliveira A, Caporali E, Koroney AS, Boudaoud A, Driouich A, Colombo L. "The developmental regulator STK controls the structure and mechanical properties of the Arabidopsis seed coat.". Plant Cell. 28 2478-2492 (2016)
PMID : 27624758

"Delude C, Moussu S, Joubès J, Ingram G and...". (2016)
Delude C, Moussu S, Joubès J, Ingram G and Domergue F.
Plant surface lipids and epidermis development. Lipids in Plant and Algae Development. Subcell Biochem. [PMID : 27023240]

"Ingram G, Fujiwara T. Special Focus Issue on...". (2016)
Ingram G, Fujiwara T.
Special Focus Issue on Plant Responses to the Environment.
Plant Cell Physiol. [PMID : 2016 27091852]

Beauzamy L, Fourquin C, Dubrulle N, Boursiac Y, Boudaoud A, Ingram G. "Endosperm turgor pressure decreases during early Arabidopsis seed development.". Development. 143 3295-9 (2016)
PMID : 27287811

"Galletti R, Verger S, Hamant O, and Ingram G....". (2016)
Galletti R, Verger S, Hamant O, and Ingram G.
Developing a ‘thick skin’ : a paradoxical role for mechanical tension in maintaining epidermis integrity ?
Development. [PMID : 27624830]

"Sucher J, Boni R, Yang P, Rogowsky P, Kumlehn...". (2016)
Sucher J, Boni R, Yang P, Rogowsky P, Kumlehn J, Krattinger SG, Keller B.
The durable wheat disease resistance gene Lr34 confers common rust and northern corn leaf blight resistance in maize. Plant Biotech J. [PMID : 27734576]

"Amanda D, Doblin MS, Galletti R, Bacic A,...". (2016)
Amanda D, Doblin MS, Galletti R, Bacic A, Ingram GC, Johnson KL.
DEFECTIVE KERNEL1 (DEK1) regulates cell walls in the leaf epidermis Plant Physiol. 2016 [PMID : 27756823]

"Marquès-Bueno M.M., Morao A.K., Cayrel A.,...". (2016)
Marquès-Bueno M.M., Morao A.K., Cayrel A., Platre M., Barberon M., Caillieux E., Colot V., Jaillais Y.#, Roudier F.# and Vert G.# (2016). A versatile Multisite Gateway-compatible promoter and transgenic line collection for cell-type specific functional genomics in Arabidopsis. Plant J. 85:320-333. # Co-corresponding authors. PMID:26662936

"Morao A. K., Bouyer D.# and Roudier F.#...". (2016)
Morao A. K., Bouyer D.# and Roudier F.# (2016). Emerging concepts in chromatin-level regulation of plant cell differentiation : timing, counting, sensing and maintaining. Curr. Opin. Plant Biol. 11:27-34. #Co-corresponding authors. PMID:27522467

"de Lucas M., Pu L., Turco G. M., Gaudinier...". (2016)
de Lucas M., Pu L., Turco G. M., Gaudinier A., Morao A. K., Harashima H., Kim D., Ron M., Sugimoto K., Roudier F. and Brady S.M. (2016). Transcriptional Regulation of Arabidopsis Polycomb Repressive Complex 2 Coordinates Cell Type Proliferation and Differentiation. Plant Cell 10:2616-2631. PMID:27650334

"Vialette-Guiraud ACM, Chauvet A, Gutierrez-Mazarie". (2016)
Vialette-Guiraud ACM, Chauvet A, Gutierrez-Mazariegos J, Eschstruth A, Ratet P, Scutt CP (2016). A conserved role for the NAM/miR164 developmental module reveals a common mechanism underlying carpel margin fusion in monocarpous and syncarpous eurosids. Frontiers in Plant Science 6 : 1239.

"Vialette-Guiraud ACM, Andres-Robin A,...". (2016)
Vialette-Guiraud ACM, Andres-Robin A, Chambrier P, Tavares R, Scutt CP (2016). The analysis of Gene Regulatory Networks in plant evo-devo. Journal of Experimental Botany 67 : 3549−63.

"Vandenbussche M, Chambrier P, Rodrigues Bento...". (2016)
Vandenbussche M, Chambrier P, Rodrigues Bento S, Morel P (2016). Petunia, your next supermodel ? Frontiers in Plant Science 7 : 72.

"Moreau F, Thevenon E, Blanvillain R,...". (2016)
Moreau F, Thevenon E, Blanvillain R, Lopez-Vidriero I, Franco-Zorrilla JM, Dumas R, Parcy F, Morel P, Trehin C, Carles CC (2016). The Myb-domain protein ULTRAPETALA1 INTERACTING FACTOR 1 controls floral meristem activities in Arabidopsis.Development 143 : 1108-19.


"Finet C, Floyd SK, Conway SJ, Zhong B, Scutt...". (2016)
Finet C, Floyd SK, Conway SJ, Zhong B, Scutt CP, Bowman JL (2016). Evolution of the YABBY gene family in seed plants. Evolution and Development 18 : 116−126.

"Breuil-Broyer S, Trehin C, Morel P, Boltz V,...". (2016)
Breuil-Broyer S, Trehin C, Morel P, Boltz V, Sun B, Chambrier P, Ito T, Negrutiu I (2016). Analysis of the Arabidopsis superman allelic series and the interactions with other genes demonstrate developmental robustness and joint specification of male–female boundary, flower meristem termination and carpel compartmentalization. Annals of Botany 117 : 905–923.

"Bombarely A, Moser M, Amrad A, Bao M, Bapaume...". (2016)
Bombarely A, Moser M, Amrad A, Bao M, Bapaume L, Barry CS, Bliek M, Boersma MR, Borghi L, Bruggmann RM, Bucher M, D’Agostino N, Davies K, Druege U, Dudareva N, Egea-Cortines M, Delledonne M, Fernandez-Pozo N, Franken P, Grandont L, Heslop-Harrison JS, Hintzsche J, Johns M, Koes R, Lv X, Lyons E, Malla D, Martinoia E, Mattson NS, Morel P, Mueller LA, Muhlemann Jl, Nouri E, Passeri V, Pezzotti M, Qi Q, Reinhardt D, Rich M, Richert-Poeggeler KR, Robbins TP, Schatz MC, Schranz ME, Schuurink RC, Schwarzacher T, Spelt K, Tang H, Urbanus SL, Vandenbussche M, Vijverberg K, Villarino GH, Warner RM, Weiss J, Yue Z, Zethof J, Quattrocchio F, Sims TL, Kuhlemeier C (2016). Insight into the evolution of the Solanaceae from the parental genomes of Petunia hybrida. Nature Plants 2 : 16074.

"J Gruel, B Landrein, P Tarr, C Schuster, Y...". (2016)
J Gruel, B Landrein, P Tarr, C Schuster, Y Refahi, A Sampathkumar, O Hamant, EM Meyerowitz and H Jönsson (2016) An epidermis-driven mechanism positions and scales stem cell niches in plants. Sci. Adv. 2 : e1500989 (2016)

"Interplay between miRNA regulation and mechanical stress for CUC gene expression at the shoot apical meristem.". (2016)
PMID12345
F. Kateryna, B. Landrein & O. Hamant*. Interplay between miRNA regulation and mechanical stress for CUC gene expression at the shoot apical meristem. Plant Signal. Behav. 11, e1127497 (2016).

"Yan H, Zhang H, Wang Q, Jian H, Qiu X,...". (2016)
Yan H, Zhang H, Wang Q, Jian H, Qiu X, Baudino S, Just J, Raymond O, Gu L, Wang J, Bendahmane M*, Tang K* (2016). The Rosa chinensis cv. Viridiflora phyllody phenotype is associated with misexpression of flower organ identity genes. Front Plant Sci. 7 : 996. * Co-corresponding authors

"Caillaud MC, Favery B. In Vivo Imaging of...". (2016)
Caillaud MC, Favery B. In Vivo Imaging of Microtubule Organization in Dividing Giant Cell. Methods Mol Biol. 2016 ;1370:137-44. doi : 10.1007/978-1-4939-3142-2_11.

"Quentin M, Baurès I, Hoefle C, Caillaud MC,...". (2016)
Quentin M, Baurès I, Hoefle C, Caillaud MC, Allasia V, Panabières F, Abad P, Hückelhoven R, Keller H, Favery B. The Arabidopsis microtubule-associated protein MAP65-3 supports infection by filamentous biotrophic pathogens by down-regulating salicylic acid-dependent defenses. J Exp Bot. 2016 Jan 21. pii : erv564. [Epub ahead of print] PMID : 26798028


"Platre MP, Jaillais Y. Guidelines for the Use...". (2016)
Platre MP, Jaillais Y. Guidelines for the Use of Protein Domains in Acidic Phospholipid Imaging. Methods Mol Biol. 2016 ;1376:175-94. doi:10.1007/978-1-4939-3170-5_15.

"Marquès-Bueno MM*, Morao AK*, Cayrel A*,...". (2016)
Marquès-Bueno MM*, Morao AK*, Cayrel A*, Platre MP, Barberon M, Caillieux E, Colot V, Jaillais Y#, Roudier F#, Vert G#. A versatile Multisite Gateway-compatible promoter and transgenic line collection for cell type-specific functional genomics in Arabidopsis. Plant J. 2016 Jan ;85(2):320-33. doi : 10.1111/tpj.13099. PMID : 266629

"Laia Armengot* ; Maria Mar Marques-Bueno* ;...". (2016)
Laia Armengot* ; Maria Mar Marques-Bueno* ; Yvon Jaillais#. Regulation of polar auxin transport by protein and lipid kinases. Journal of Experimental Botany. 2016 ; doi : 10.1093/jxb/erw216


"Simon MLA*, Platre MP*, Marquès-Bueno MM,...". (2016)
Simon MLA*, Platre MP*, Marquès-Bueno MM, Armengot L, Stanislas T, Bayle V, Caillaud MC# and Jaillais Y#. 2016.A PI4P-driven electrostatic field controls cell membrane identity and signaling in plants. Nature Plants. ARTICLE NUMBER : 16089 | DOI : 10.1038/NPLANTS.2016.89

"Kareem Elsayad*, Stephanie Werner*, Marçal...". (2016)
Kareem Elsayad*, Stephanie Werner*, Marçal Gallemí, Jixiang Kong, Edmundo R. Sánchez Guajardo, Lijuan Zhang, Yvon Jaillais, Thomas Greb, and Youssef Belkhadir, Mapping the subcellular mechanical properties of live cells in tissues with fluorescence emission–Brillouin imaging. Sience Signaling. Jul 2016 : Vol. 9, Issue 435, pp. rs5. DOI : 10.1126/scisignal.aaf6326/


"Jaillais Yvon# and Gregory Vert#. Brassinosteroid". (2016)
Jaillais Yvon# and Gregory Vert#. Brassinosteroid signaling and BRI1 dynamics went underground. Current Opinion in Plant Biology 2016 Oct ;33:92-100. doi : 10.1016/j.pbi.2016.06.014. Review.

Lauxmann M. A., Annunziata M. G., Brunoud G., Wahl V., Koczut A., Burgos A., Olas J.J., Maximova E., Abel C., Schlereth A., Soja A.M., Bläsing O.E. and Lunn J.E. and Vernoux T., & Stitt M. "Reproductive failure in Arabidopsis thaliana under transient carbohydrate limitation : Flowers and very young siliques are jettisoned and the meristem is maintained to allow successful resumption of reproductive growth". Plant, Cell and Environment 4 745-767 (2016)
http://doi.org/10.1111/pce.12634

Legrand J., Léger J.-B., Robin S., Vernoux T. & Guédon Y. "Modelling the influence of dimerisation sequence dissimilarities on the auxin signalling network". BMC Systems Biology 1 (2016)
http://doi.org/10.1186/s12918-016-0254-7

Parcy F., Vernoux T. & Dumas R. "A Glimpse beyond Structures in Auxin-Dependent Transcription". Trends in Plant Science 7 574–583 (2016)
http://doi.org/10.1016/j.tplants.20...

Galvan-Ampudia C. S., Chaumeret A. M., Godin C. & Vernoux T. "Phyllotaxis : from patterns of organogenesis at the meristem to shoot architecture". Wiley Interdisciplinary Reviews: Developmental Biology 5 460-473 (2016)
http://doi.org/10.1002/wdev.231

Refahi, Y., Brunoud, G., Farcot, E., Jean-Marie, A., Pulkkinen, M., Vernoux, T., & Godin, C. "A stochastic multicellular model identifies biological watermarks from disorders in self-organized patterns of phyllotaxis". eLife 5 231–244 (2016)
http://doi.org/10.7554/eLife.14093

Larrieu, A., & Vernoux, T. "Q&A : How does jasmonate signaling enable plants to adapt and survive ?". BMC Biology 1 79 (2016)
http://doi.org/10.1186/s12915-016-0308-8

Louveaux M, Julien JD, Mirabet V, Boudaoud A, Hamant O. "Cell division plane orientation based on tensile stress in Arabidopsis thaliana.". Proc Natl Acad Sci U S A. 113 E4294-303 (2016)
PMID : 27436908

2015

"J. Chopin*, A. Boudaoud & M. Adda-Bedia....". (2015)
J. Chopin*, A. Boudaoud & M. Adda-Bedia. Morphology and dynamics of a crack front propagating in a model disordered material. J. Mech. Phys. Solids 74, 38–48 (2015).

Boudon F, Chopard J, Ali O, Gilles B, Hamant O, Boudaoud A, Traas J, Godin C. "A computational framework for 3D mechanical modeling of plant morphogenesis with cellular resolution.". PLoS Comput Biol. 11 e1003950 (2015)
PMID : 25569615

Beauzamy L, Derr J, Boudaoud A. "Quantifying Hydrostatic Pressure in Plant Cells by using Indentation with an Atomic Force Microscope". Biophys J. 108 2448-2456 (2015)
PMID : 25992723

Beauzamy L, Louveaux M, Hamant O, Boudaoud A. "Mechanically, the shoot apical meristem of Arabidopsis behaves like a shell inflated by a pressure of about 1 MPa.". Front Plant Sci. 6 (2015)
PMID : 27074136

Barbier de Reuille P, Routier-Kierzkowska AL, Kierzkowski D, Bassel GW, Schüpbach T, Tauriello G, Bajpai N, Strauss S, Weber A, Kiss A, Burian A, Hofhuis H, Sapala A, Lipowczan M, Heimlicher MB, Robinson S, Bayer EM, Basler K, Koumoutsakos P, Roeder AH, Aegerter-Wilmsen T, Nakayama N, Tsiantis M, Hay A, Kwiatkowska D, Xenarios I, Kuhlemeier C, Smith RS. "MorphoGraphX : A platform for quantifying morphogenesis in 4D.". Elife 4 (2015)
PMID : 25946108

"Creff A, Brocard L, Ingram G. A mechanically...". (2015)
Creff A, Brocard L, Ingram G.
A mechanically sensitive cell layer regulates the physical properties of the Arabidopsis seed coat.
Nat Commun. 2015 [PMID : 25702924]

"Klein-Cosson C, Chambrier P, Rogowsky PM,...". (2015)
Klein-Cosson C, Chambrier P, Rogowsky PM, Vernoud V.
Regulation of a maize HD-ZIP IV transcription factor by a non-conventional RDR2-dependent small RNA.
Plant J. 2015 [PMID:25619590]

"Galletti R, Johnson KL, Scofield S, San-Bento...". (2015)
Galletti R, Johnson KL, Scofield S, San-Bento R, Watt AM, Murray JA, Ingram GC.
DEFECTIVE KERNEL 1 promotes and maintains plant epidermal differentiation. Development. 2015 [PMID : 25953348]

"McLaughlin JE, Bin-Umer MA, Widiez T, Finn D,...". (2015)
McLaughlin JE, Bin-Umer MA, Widiez T, Finn D, McCormick S, Tumer NE.
A Lipid Transfer Protein Increases the Glutathione Content and Enhances Arabidopsis Resistance to a Trichothecene Mycotoxin. [PMID : 26057253]

"Grimault A, Gendrot G, Chaignon S, Gilard F,...". (2015)
Grimault A, Gendrot G, Chaignon S, Gilard F, Tcherkez G, Thévenine J, Dubreucq B, Depège-Fargeix N, Rogowsky PM.
Role of B3 domain transcription factors of the AFL family in maize kernel filling. Plant Science. 2015 [PMID : 26025525]

"Grimault A, Gendrot G, Chaignon S, Gilard F,...". (2015)
Grimault A, Gendrot G, Chaignon S, Gilard F, Tcherkez G, Thévenine J, Dubreucq B, Depège-Fargeix N, Rogowsky PM.
Role of B3 domain transcription factors of the AFL family in maize kernel filling. Plant Science. 2015 [PMID : 26025525]

"La Rocca N, Manzotti PS, Cavaiuolo M,...". (2015)
La Rocca N, Manzotti PS, Cavaiuolo M, Barbante A, Dalla Vecchia F, Gabotti D, Gendrot G, Horner DS, Krstajic J, Persico M, Rascio N, Rogowsky P, Scarafoni A, Consonni G.
The maize fused leaves1 (fdl1) gene controls organ separation in the embryo and seedling shoot and promotes coleoptile opening.
J Exp Bot. 2015 [PMID : 26093144]

"Ingram G and Gutierrez-Marcos J. Peptide...". (2015)
Ingram G and Gutierrez-Marcos J.
Peptide signalling during angiosperm seed development.
J Exp Bot. 2015 [PMID : 26195729]

"Galletti R and Ingram GC. Communication is...". (2015)
Galletti R and Ingram GC.
Communication is key : reducing DEK1 activity reveals a link between cell-cell contacts and epidermal cell differentiation status.
Communicative & Integrative Biology, 2015 [PMID : 27064205]

"Grimault A, Gendrot G, Chamot S, Widiez T,...". (2015)
Grimault A, Gendrot G, Chamot S, Widiez T, Rabillé H, Gérentes M-F, Creff A, Thévenin J, Dubreucq B, Ingram GC, Rogowsky PM, and Depège-Fargeix, N.
ZmZHOUPI, an endosperm-specific bHLH transcription factor involved in maize seed development.
Plant J. 2015 [PMID : 26361885]

"Sosso D, Luo D, Li QB, Sasse J, Yang J,...". (2015)
Sosso D, Luo D, Li QB, Sasse J, Yang J, Gendrot G, Suzuki M, Koch KE, McCarty DR, Chourey PS, Rogowsky PM, Ross-Ibarra J, Yang B, Frommer WB.
Seed filling in domesticated maize and rice depends on SWEET-mediated hexose transport.
Nat Genet. 2015 [PMID : 26523777]

"Rousseau D*, Widiez T*, Di Tommaso S, Rositi...". (2015)
Rousseau D*, Widiez T*, Di Tommaso S, Rositi H, Adrien J, Maire E, Langer M, Olivier C, Peyrin F, Rogowsky P.
Fast virtual histology using X-ray in-line phase tomography : application to the 3D anatomy of maize developing seeds.
Plant Methods. 2015 [PMID:26688690]

"Magnard JL, Roccia A, Caissard JC, Vergne P,...". (2015)
Magnard JL, Roccia A, Caissard JC, Vergne P, Sun P, Hecquet R, Dubois A, Hibrand-Saint Oyant L, Jullien F, Nicolè F, Raymond O, Huguet S, Baltenweck R, Meyer S, Claudel P, Jeauffre J, Rohmer M, Foucher F, Hugueney P, Bendahmane M and Baudino S. (2015). PLANT VOLATILES. Biosynthesis of monoterpene scent compounds in roses. Science 349:81-3. PMID:26138978. Perspective in Science.

"Willing E-M., Rawat V., Mandáková T., Maumus...". (2015)
Willing E-M., Rawat V., Mandáková T., Maumus F., James G.V., Nordström K.J.V., Becker C., Warthmann N., Chica C., Szarzynska B., Zytnicki M., Albani M. C., Kiefer C., Bergonzi S., Castaings L., Mateos J.L., Berns M. C., Bujdoso N., Piofczyk T., de Lorenzo L., Barrero-Sicilia C., Mateos I., Piednoël M., Hagmann J., Chen-Min-Tao R., Iglesias-Fernández R., Schuster S.C., Alonso-Blanco C., Roudier F., Carbonero P., Paz-Ares J., Davis S.J., Pecinka A., Quesneville H., Colot V., Lysak M.A., Weigel D., Coupland G. and Schneeberger K.(2015). Genome expansion of Arabis alpina linked with retrotransposition and reduced symmetric DNA methylation. Nature Plants 1:14023. PMID:27246759

"Ikeuchi M., Iwase A., Rymen B., Harashima H.,...". (2015)
Ikeuchi M., Iwase A., Rymen B., Harashima H., Shibata M., Ohnuma M., Breuer C., Morao A.K., de Lucas M., De Veylder L., Justin Goodrich J., Brady S. M., Roudier F. and Sugimoto K. (2015). PRC2 represses dedifferentiation of mature somatic cells in Arabidopsis. Nature Plants 1:15089. PMID:27250255. N&V in Nature Plants.

"Sheehan H, Moser M, Klahre U, Esfeld K,...". (2015)
Sheehan H, Moser M, Klahre U, Esfeld K, Dell’Olivo A, Mandel T, Metzger S, Vandenbussche M, Freitas L, Kuhlemeier C (2015). MYB-FL controls gain and loss of floral UV absorbance, a key trait affecting pollinator preference and reproductive isolation. Nature Genetics. 48:159-66.


"Rich MK, Schorderet M, Bapaume L, Falquet L,...". (2015)
Rich MK, Schorderet M, Bapaume L, Falquet L, Morel P, Vandenbussche M, Reinhardt D. (2015). The Petunia GRAS transcription factor ATA/RAM1 regulates symbiotic gene expression and fungal morphogenesis in arbuscular mycorrhiza. Plant Physiology. 168:788-97.

"Prunet N, Morel P, Champelovier P, Thierry...". (2015)
Prunet N, Morel P, Champelovier P, Thierry AM, Negrutiu I, Jack T, Trehin C (2015). SQUINT promotes stem cell homeostasis and floral meristem termination in Arabidopsis through APETALA2 and CLAVATA signalling. Journal of Experimental Botany. 66:6905-16.

"Poncet V, Scutt C, Tournebize R, Villegente...". (2015)
Poncet V, Scutt C, Tournebize R, Villegente M, Cueff G, Rajjou L, Balliau T, Zivy M, Fogliani B, Job C, de Kochko A, Sarramegna-Burtet V, Job D (2015). The Amborella vacuolar processing enzyme family. Frontiers in Plant Science 6 : 618.

"Andres-Robin A, Vialette-Guiraud A, Scutt C...". (2015)
Andres-Robin A, Vialette-Guiraud A, Scutt C (2015). Amborella trichopoda et la recherche à Lyon. Sauvages et Cultivées 7 : 52-53.

"O. Raymond, J. Just, A. Dubois, P. Vergne, J....". (2015)
O. Raymond, J. Just, A. Dubois, P. Vergne, J. Szecsi, M. Bendahmane (2015). Rose genomics : challenges and perspectives. Acta Horticulturae 1087 : XXV International EUCARPIA Symposium Section Ornamentals. pp35-40.

"Digiuni A, Berne-Dedieu A, Martinez-Torres C,...". (2015)
Digiuni A, Berne-Dedieu A, Martinez-Torres C, Szecsi J, Bendahmane M, Arneodo A, Argoul F. (2015) Single Cell Wall Nonlinear Mechanics Revealed by a Multiscale Analysis of AFM Force-Indentation Curves. Biophys J. 108(9) : 2235-48.

"Magnard JL, Roccia A, Caissard JC, Vergne P,...". (2015)
Magnard JL, Roccia A, Caissard JC, Vergne P, Sun P, Hecquet R, Dubois A, Hibrand-Saint Oyant L, Jullien F, Nicolè F, Raymond O, Huguet S, Baltenweck R, Meyer S, Claudel P, Jeauffre J, Rohmer M, Foucher F, Hugueney P*, Bendahmane M*, Baudino S* (2015) Biosynthesis of monoterpene scent compounds in roses. Science. Jul 3 ;349(6243) : 81-3. * Co-corresponding authors

"Martins S, Dohmann EM, Cayrel A, Johnson A,...". (2015)
Martins S, Dohmann EM, Cayrel A, Johnson A, Fischer W, Pojer F, Satiat-Jeunemaître B, Jaillais Y, Chory J, Geldner N, Vert G. Internalization and vacuolar targeting of the brassinosteroid hormone receptor BRI1 are regulated by ubiquitination. Nat Commun. 2015 Jan 21 ;6:6151.


"Belkhadir Y, Jaillais Y#. The molecular...". (2015)
Belkhadir Y, Jaillais Y#. The molecular circuitry of brassinosteroid signaling. New Phytol. 2015 Apr ;206(2):522-40.

"Thazar-Poulot N, Miquel M, Fobis-Loisy I,...". (2015)
Thazar-Poulot N, Miquel M, Fobis-Loisy I, Gaude T#. Peroxisome extensions deliver the Arabidopsis SDP1 lipase to oil bodies. PNAS. 2015 Mar 31 ;112(13):4158-63.

"The epidermis coordinates auxin-induced stem growth in response to shade". Genes and Development 30 (2015)
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Carl Procko, Yogev Burko, Yvon Jaillais, Karin Ljung, Jeff A. Long, and Joanne Chory. The epidermis coordinates auxin-induced stem growth in response to shade. Genes and Development. 2015 30 (13)

Landrein B, Refahi Y, Besnard F, Hervieux N, Mirabet V, Boudaoud A, Vernoux T, Hamant O. "Meristem size contributes to the robustness of phyllotaxis in Arabidopsis.". Journal of Experimental Botany 66 1317-24 (2015)
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Larrieu A., Champion A., Legrand J., Lavenus J., Mast D., Brunoud G., Oh J., Guyomarc’h S., Pizot M., Farmer E.E., Turnbull C., Vernoux T.*, Bennett M.*, & Laplaze L.* "A fluorescent hormone biosensor reveals the dynamics of jasmonate signalling in plants". Nature Communications 6 (2015)
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Liao, C.-Y., Smet, W., Brunoud, G., Yoshida, S., Vernoux, T., & Weijers, D. "Reporters for sensitive and quantitative measurement of auxin response". Nature Methods 3 207-210 (2015)
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Larrieu, A., & Vernoux, T. "Comparison of plant hormone signalling systems". Essays in Biochemistry 165-181 (2015)
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Farcot E, Lavedrine C, & Vernoux T "A modular analysis of the auxin signalling network". PLoS ONE 10 (2015)
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Colling, J., Tohge, T., De Clercq, R., Brunoud, G., Vernoux, T., Fernie, A. R., Makunga, N.P., Goossens, A., & Pauwels, L. "Overexpression of the Arabidopsis thaliana signalling peptide TAXIMIN1 affects lateral organ development". Journal of Experimental Botany 66 5337–5349 (2015)
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Lavedrine, C., Farcot, E., & Vernoux, T. "Modeling plant development : From signals to gene networks". Current Opinion in Plant Biology 148–153 (2015)
PMID : 26247125

Cerutti, G., Ribes, S., Godin, C., Galvan-Ampudia, C., & Vernoux, T. "3-d Tessellation of Plant Tissue-A Dual Optimization Approach to Cell-Level Meristem Reconstruction from Microscopy Images". IEEE - 2015 International Conference on 3D Vision 443–451 (2015)
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Moreno-Risueno, M. A., Sozzani, R., Yardımcı, G. G., Petricka, J. J., Vernoux, T., Blilou, I., Alonso, J., Winter, C.M., Ohler, U., Scheres, B., & Benfey, P. N. "Transcriptional control of tissue formation throughout root development". Science 6259 426–30 (2015)
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Landrein B, Kiss A, Sassi M, Chauvet A, Das P, Cortizo M, Laufs P, Takeda S, Aida M, Traas J, Vernoux T, Boudaoud A, Hamant O. "Mechanical stress contributes to the expression of the STM homeobox gene in Arabidopsis shoot meristems.". Elife 4 (2015)
PMID : 26623515

2014

"Ali, O., Mirabet, V., Godin, C., Traas, J....". (2014)
Ali, O., Mirabet, V., Godin, C., Traas, J. (2014). Physical Models of Plant Development. ANNUAL REVIEW OF CELL AND DEVELOPMENTAL BIOLOGY 30, 59-78.

"Collaudin, S. and Mirabet, V. (2014). Models...". (2014)
Collaudin, S. and Mirabet, V. (2014). Models to reconcile plant science and stochasticity. FRONTIERS IN PLANT SCIENCE 5, 643.

Beauzamy L, Nakayama N, Boudaoud A. "Flowers under pressure : ins and outs of turgor regulation in development.". Ann Bot. 114 1517-33 (2014)
PMID : 25288632

Durand-Smet P, Chastrette N, Guiroy A, Richert A, Berne-Dedieu A, Szecsi J, Boudaoud A, Frachisse JM, Bendahmane M, Hamant O, Asnacios A. "A comparative mechanical analysis of plant and animal cells reveals convergence across kingdoms". Biophys J. 107 2237-44 (2014)
PMID : 25418292

Oftadeh R, Haghpanah B, Vella D, Boudaoud A, Vaziri A. "Optimal Fractal-like Hierarchical Honeycombs.". Phys Rev Lett. 113 104301 (2014)
PMID : 25238362

"Sassi M, Ali O, Boudon F, Cloarec G, Abad U,...". (2014)
Sassi M, Ali O, Boudon F, Cloarec G, Abad U, Cellier C, Milani P, Chen X, Friml J, Vernoux T, Godin C, Hamant O & Traas J (2014) An auxin-mediated shift towards growth isotropy promotes organ formation at the shoot apical meristem in Arabidopsis. CURRENT BIOLOGY 24:2335-2342

"Rozier F, Mirabet V, Vernoux T & Das P (2014)...". (2014)
Rozier F, Mirabet V, Vernoux T & Das P (2014) Analysis of 3-D gene expression patterns in plants using whole-mount RNA in situ hybridization. NATURE PROTOCOLS 9 : 2464-2475

Milani P, Mirabet V, Cellier C, Rozier F, Hamant O, Das P, Boudaoud A. "Matching patterns of gene expression to mechanical stiffness at cell resolution through quantitative tandem epifluorescence and nanoindentation.". Plant Physiol. 165 1399-1408 (2014)
PMID : 24924426

Sampathkumar A, Krupinski P, Wightman R, Milani P, Berquand A, Boudaoud A, Hamant O, Jönsson H, Meyerowitz EM. "Sub-cellular and supra-cellular mechanical stress prescribes cytoskeleton behavior in Arabidopsis cotyledon pavement cells". Elife. 3 e01967 (2014)
PMID : 24740969

Bonazzi D, Julien JD, Romao M, Seddiki R, Piel M, Boudaoud A, Minc N. "Symmetry breaking in spore germination relies on an interplay between polar cap stability and spore wall mechanics. ". Dev Cell. 46 388 (2014)
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Ebrahimi H, Ajdari A, Vella D, Boudaoud A, Vaziri A. "Anisotropic Blistering Instability of Highly Ellipsoidal Shells.". Phys Rev Lett. 112 094302 (2014)
PMID : 24655258

"Bayart, E., Boudaoud, A., and Adda-Bedia, M....". (2014)
Bayart, E., Boudaoud, A., and Adda-Bedia, M. (2014). Tuning the ordered states of folded rods by isotropic confinement. PHYSICAL REVIEW E 89, 012407.

Boudaoud A, Burian A, Borowska-Wykręt D, Uyttewaal M, Wrzalik R, Kwiatkowska D, Hamant O. "FibrilTool, an ImageJ plugin to quantify fibrillar structures in raw microscopy images.". Nat Protoc. 9 457-63 (2014)
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"Hamant, O., Das, P. Burian, A. (2014)....". (2014)
Hamant, O., Das, P. Burian, A. (2014). Time-lapse imaging of developing meristems using confocal laser scanning microscope. METHODS IN MOLECULAR BIOLOGY 1080, 111.

"Landrein B. and Vernoux T. (2014) Auxin,...". (2014)
Landrein B. and Vernoux T. (2014) Auxin, chief architect of the shoot Apex. In Auxin and its role in plant development, Zazimalova et al., eds (Springer-Verlag Wien), pp. 191-212

"Widiez T, Symeonidi A, Luo C, Lam E, Lawton...". (2014)
Widiez T, Symeonidi A, Luo C, Lam E, Lawton M, Rensing SA
The chromatin landscape of the moss Physcomitrella patens and its dynamics during development and drought stress. Plant Journal 2014 [PMID : 24779858]

"Chardin C., Girin T., Roudier F., Meyer C....". (2014)
Chardin C., Girin T., Roudier F., Meyer C. and Krapp A. (2014). The plant RWP-RK transcription factors : key regulators of nitrogen responses and of gametophyte development. J. Exp. Bot. 65:5577-87.PMID:24987011

"Cortijo S., Wardenaar R., Colomé-Tatché M.,...". (2014)
Cortijo S., Wardenaar R., Colomé-Tatché M., Gilly A., Etcheverry M., Labadie K., Caillieux E., Hospital F., Aury J-M, Wincker P., Roudier F., Jansen R.C., Colot V. and Johannes F. (2014). Mapping the epigenetic basis of complex traits. Science 343:1145-8. PMID:24505129. Perspective in Science, Highlight in NRG, F1000 [4]

"Scutt CP, Vandenbussche M (2014) Current...". (2014)
Scutt CP, Vandenbussche M (2014) Current trends and future directions in flower development research. Annals of Botany 114 : 1399-1406.

"Costanzo E, Trehin C, Vandenbussche M (2014)...". (2014)
Costanzo E, Trehin C, Vandenbussche M (2014) The role of WOX genes in flower development. Annals Botany 114 : 1545-1553.


"Sassi M, Ali O, Boudon F, Cloarec G, Abad U,...". (2014)
Sassi M, Ali O, Boudon F, Cloarec G, Abad U, Cellier C, Chen X, Gilles B, Milani P, Friml J, Vernoux T, Godin C, Hamant O, Traas J. (2014) An auxin-mediated shift toward growth isotropy promotes organ formation at the shoot meristem in Arabidopsis. Curr Biol. 24(19):2335-42.

"Traas J, Sassi M. (2014) Plant development :...". (2014)
Traas J, Sassi M. (2014) Plant development : from biochemistry to biophysics and back. Curr Biol. 24(6):R237-8.

"Landrein B. and Vernoux T. (2014) Auxin,...". (2014)
Landrein B. and Vernoux T. (2014) Auxin, chief architect of the shoot Apex. In Auxin and its role in plant development, Zazimalova et al., eds (Springer-Verlag Wien), pp. 191-212

"Hamant, O., Das, P. Burian, A. (2014)....". (2014)
Hamant, O., Das, P. Burian, A. (2014). Time-lapse imaging of developing meristems using confocal laser scanning microscope. METHODS IN MOLECULAR BIOLOGY 1080, 111.

"Yan, H, Zhang, H, Chen M, Jiana H, Baudino S,...". (2014)
Yan, H, Zhang, H, Chen M, Jiana H, Baudino S, Caissard JC, Bendahmane M, Lia S, Zhang T, Wang Q, Qiu Q, Zhou N, Tanga K (2014). Transcriptome and gene expression analysis during flower blooming in Rosa chinensis ‘Pallida’. GENE 540 : 96-103

"Durand-Smet P, Chastrette N, Guiroy A,...". (2014)
Durand-Smet P, Chastrette N, Guiroy A, Richert A, Berne-Dedieu A, Szecsi J, Boudaoud A, Frachisse JM, Bendahmane M, Hamant O, Asnacios A. (2014) A mechanical analysis of plant cells and animal cells reveals convergence across kingdoms. Biophys J. 107(10):2237-44.

"Szécsi J, Wippermann B & Bendahmane M. (2014)...". (2014)
Szécsi J, Wippermann B & Bendahmane M. (2014) Genetic and phenotypic analyses of petal development in Arabidopsis. In Methods In Molecular Biology - Flower Development, Ed. F. Wellmer, JL Riechmann. Springer Humana press. Methods Mol Biol. 1110 : 191-202.

"Caillaud MC, Wirthmueller L, Sklenar J,...". (2014)
Caillaud MC, Wirthmueller L, Sklenar J, Findlay K, Piquerez SJ, Jones AM, Robatzek S, Jones JD, Faulkner C. The plasmodesmal protein PDLP1 localises to haustoria-associated membranes during downy mildew infection and regulates callose deposition. PLoS Pathog. 2014 Nov 13 ;10(10):e1004496.

"Simon M*, Platre M*, Assil S, van Wijk R,...". (2014)
Simon M*, Platre M*, Assil S, van Wijk R, Chen WC, Chory J , Dreux M, Munnik T and Jaillais Y. 2014. A multi-colour/multi-affinity marker set to visualize phosphoinositide dynamics in Arabidopsis. Plant Journal, 77, 322-337

"Durand E, Méheust R, Soucaze M, Goubet PM,...". (2014)
Durand E, Méheust R, Soucaze M, Goubet PM, Gallina S, Poux C, Fobis-Loisy I, Guillon E, Gaude T, Sarazin A, Figeac M, Prat E, Marande W, Bergès H, Vekemans X, Billiard S, Castric V. Dominance hierarchy arising from the evolution of a complex small RNA regulatory network. Science. 2014 Dec 5 ;346(6214):1200-5.

Besnard, F., Refahi, Y., Morin, V., Marteaux, B., Brunoud, G., Chambrier, P., Rozier F., Mirabet V., Legrand J., Lainé S., Thévenon E., Farcot E., Cellier C., Das P., Bishopp A., Dumas R., Parcy F., Helariutta Y., Boudaoud A., Godin C., Traas J., Guédon Y., & Vernoux, T. "Cytokinin signalling inhibitory fields provide robustness to phyllotaxis.". Nature. 505 417-21 (2014)
PMID : 24336201

Galvan-Ampudia, C. S., & Vernoux, T. "Signal integration by GSK3 kinases in the root". Nature Cell Biology 1 21-23 (2014)
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Band, L. R., Wells, D. M., Fozard, J. A., Ghetiu, T., French, A. P., Pound, M. P., Wilson M. H., Yu L., Li W., Hijazi H.I., Oh J., Pearce S.P., Perez-Amador M.A., Yun J., Kramer E., Alonso J.M., Godin C., Vernoux T., Hodgman T.C., Pridmore T.P., Swarup R., King J.R., & Bennett, M. J "Systems analysis of auxin transport in the Arabidopsis root apex". Plant Cell 3 862–875 (2014)
http://doi.org/10.1105/tpc.113.119495

Nanao, M. H., Vinos-Poyo, T., Brunoud, G., Thévenon, E., Mazzoleni, M., Mast, D., Lainé S., Wang S., Hagen G., Li H., Guilfoyle T.J., Parcy F., Vernoux T., & Dumas, R. "Structural basis for oligomerization of auxin transcriptional regulators". Nature Communications 5 (2014)
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Besnard F., Rozier F., & Vernoux T. "The AHP6 cytokinin signaling inhibitor mediates an auxin-cytokinin crosstalk that regulates the timing of organ initiation at the shoot apical meristem". Plant Signaling & Behavior 9 4-7 (2014)
http://doi.org/10.4161/psb.28788

Wang, Q., Kohlen, W., Rossmann, S., Vernoux, T., & Theres, K. "Auxin Depletion from the Leaf Axil Conditions Competence for Axillary Meristem Formation in Arabidopsis and Tomato". Plant Cell 5 2068–2079 (2014)
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Bao, Y., Aggarwal, P., Robbins, N. E., Sturrock, C. J., Thompson, M. C., Tan, H. Q., Tham C., Duan L., Rodriguez P.L., Vernoux T., Mooney S.J., Bennett M.J. & Dinneny, J. R. "Plant roots use a patterning mechanism to position lateral root branches toward available water". Proceedings of the National Academy of Sciences of the United States of America 25 9319–24 (2014)
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Rozier, F., Mirabet, V., Vernoux, T., & Das, P. "Analysis of 3D gene expression patterns in plants using whole-mount RNA in situ hybridization". Nature Protocols 10 2464-2475 (2014)
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Sassi, M., Ali, O., Boudon, F., Cloarec, G., Abad, U., Cellier, C., Milani P., Chen X., Friml J., Vernoux T., Godin C., Hamant O., & Traas, J. "An Auxin-Mediated Shift toward Growth Isotropy Promotes Organ Formation at the Shoot Meristem in Arabidopsis". Current Biology 19 2335-2342 (2014)
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Hohm, T., Demarsy, E., Quan, C., Allenbach Petrolati, L., Preuten, T., Vernoux, T., Bergmann S., & Fankhauser, C. "Plasma membrane H+ -ATPase regulation is required for auxin gradient formation preceding phototropic growth". Molecular Systems Biology 9 751 (2014)
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Qi, J., Wang, Y., Yu, T., Cunha, A., Wu, B., Vernoux, T., Meyerowitz E.M., & Jiao, Y. "Auxin depletion from leaf primordia contributes to organ patterning". Proceedings of the National Academy of Sciences 52 18769–18774 (2014)
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2013

"Landrein B, Hamant O. How mechanical stress...". (2013)
Landrein B, Hamant O. How mechanical stress controls microtubule behavior and morphogenesis in plants : history, experiments and revisited theories. PLANT J. 75, 324-38

"Louveaux, M. and Hamant, O. (2013). The...". (2013)
Louveaux, M. and Hamant, O. (2013). The mechanics behind cell division. CURRENT OPINION IN PLANT BIOLOGY 16, 774.

"Hamant, O. (2013). Cell Biology : Cytoskeleton...". (2013)
Hamant, O. (2013). Cell Biology : Cytoskeleton Network Topology Feeds Back on Its Regulation. CURRENT BIOLOGY 23, R963.

"Hamant, O. (2013). Widespread mechanosensing...". (2013)
Hamant, O. (2013). Widespread mechanosensing controls the structure behind the architecture in plants. CURRENT OPINION IN PLANT BIOLOGY 16, 654.

"de Bossoreille de Ribou, S., Douam, F.,...". (2013)
de Bossoreille de Ribou, S., Douam, F., Hamant, O., Frohlich, M.W. and Negrutiu I. (2013). Plant science and agricultural productivity : why are we hitting the yield ceiling ? PLANT SCIENCE 210, 159.

"Hamant, O. (2013). Integrative Cell Biology ;...". (2013)
Hamant, O. (2013). Integrative Cell Biology ; Katanin at the Crossroads. CURRENT BIOLOGY 23, R206.

"Burian, A., Ludynia, M., Uyttewaal, M.,...". (2013)
Burian, A., Ludynia, M., Uyttewaal, M., Traas, J., Boudaoud, A., Hamant, O. and Kwiatkowska, D. (2013). A correlative microscopy approach relates microtubule behaviour, local organ geometry, and cell growth at the Arabidopsis shoot apical meristem. JOURNAL OF EXPERIMENTAL BOTANY 64, 5753.

"Milani, P., Braybrook, S.A. and Boudaoud, A....". (2013)
Milani, P., Braybrook, S.A. and Boudaoud, A. (2013). Shrinking the hammer : micromechanical approaches to morphogenesis. JOURNAL OF EXPERIMENTAL BOTANY 64, 4651.

"O’Maoileidigh, D.S., Wuest, S.E., Rae, L.,...". (2013)
O’Maoileidigh, D.S., Wuest, S.E., Rae, L., Raganelli, A., Ryan, P.T., Kwasniewska, K., Das, P., Lohan, A.J., Loftus, B., Graciet, E., Wellmer, F. (2013). Control of Reproductive Floral Organ Identity Specification in Arabidopsis by the C Function Regulator AGAMOUS. PLANT CELL 25, 2482.

"Landrein, B., Lathe, R., Bringmann, M.,...". (2013)
Landrein, B., Lathe, R., Bringmann, M., Vouillot, C., Ivakov, A., Boudaoud, A., Persson, S., and Hamant, O. (2013). Impaired Cellulose Synthase Guidance Leads to Stem Torsion and Twists Phyllotactic Patterns in Arabidopsis. CURRENT BILOGY 23, 895.

"Deboeuf, S., Katzav, E., Boudaoud, A., Bonn,...". (2013)
Deboeuf, S., Katzav, E., Boudaoud, A., Bonn, D. and Adda-Bedia, M. (2013). Comparative Study of Crumpling and Folding of Thin Sheets. PHYSICAL REVIEW LETTERS 110, 104301.

"Bendahmane M, Dubois A, Raymond O and Bris...". (2013)
Bendahmane M, Dubois A, Raymond O and Bris ML. (2013). Genetics and genomics of flower initiation and development in roses. J. Exp. Bot. 64:847-57. PMID:23364936

"Marchive C., Roudier F., Castaings L., Bréhaut...". (2013)
Marchive C., Roudier F., Castaings L., Bréhaut V., Blondet E., Colot V., Meyer C. and Krapp A. (2013). Nuclear retention of the transcription factor NLP7 orchestrates the early response to nitrate in plants. Nature Comm. 4:1713.PMID:2359188. F1000 [4].

"Grimanelli D.# and Roudier F.# (2013)....". (2013)
Grimanelli D.# and Roudier F.# (2013). Epigenetics and development in plants : green light to convergent innovations. Curr. Top. Dev. Biol. 104:189-222. #Co-corresponding authors. PMID:23587242

"Chica C., Szarzynska B., Chen-Min-Tao R.,...". (2013)
Chica C., Szarzynska B., Chen-Min-Tao R., Duvernois-Berthet E., Kassam M., Colot V# and Roudier F.# (2013). Profiling spatial enrichment of chromatin marks suggests an additional epigenomic dimension in gene regulation. Frontiers in Life Sciences 7, 80-87. # Co-corresponding authors.

"Verhoef N, Yokota T, Shibata K, de Boer G-J,...". (2013)
Verhoef N, Yokota T, Shibata K, de Boer G-J, Gerats T, Vandenbussche M, Koes R, Souer E (2013). Brassinosteroid biosynthesis and signalling in Petunia hybrida. Journal of Experimental Botany 64 : 2435-2448.

"Vandenbussche M, Zethof J, Gerats T (2013)....". (2013)
Vandenbussche M, Zethof J, Gerats T (2013). Massive indexed parallel identification of transposon flanking sequences. Methods Mol Biol 1057 : 251-264.

"Vandenbussche M, Zethof J, Gerats T (2013)....". (2013)
Vandenbussche M, Zethof J, Gerats T (2013). Transposon display : a versatile method for transposon tagging. Methods Mol Biol 1057 : 239-250.

"Trehin C, Schrempp S, Chauvet A, Berne-Dedieu...". (2013)
Trehin C, Schrempp S, Chauvet A, Berne-Dedieu A, Thierry A-M, Faure J-M, Negrutiu I, Morel P (2013). QUIRKY interacts with STRUBBELIG and PAL OF QUIRKY to regulate cell growth anisotropy during Arabidopsis gynoecium development. Development 140 : 4807-4817.

"Gerats T, Zethof J, Vandenbussche M (2013)....". (2013)
Gerats T, Zethof J, Vandenbussche M (2013). Identification and applications of the Petunia class II Act1/dTph1 transposable element system. Methods Mol Biol 1057 : 223-237.

"Finet C, Berne-Dedieu A, Scutt CP, Marlétaz F...". (2013)
Finet C, Berne-Dedieu A, Scutt CP, Marlétaz F (2013). Evolution of the ARF gene family in land plants : old domains, new tricks. Molecular Biology and Evolution 30 : 45-56.

"de Bossoreille de Ribou S, Douam F, Hamant O,...". (2013)
de Bossoreille de Ribou S, Douam F, Hamant O, Frohlich MW, Negrutiu I (2013) Plant science and agricultural productivity : Why are we hitting the yield ceiling ? Plant Science 210:159-76.

"Wells DM, Laplaze L, Bennett MJ, Vernoux T....". (2013)
Wells DM, Laplaze L, Bennett MJ, Vernoux T. (2013) Biosensors for phytohormone quantification : challenges, solutions, and opportunities. Trends Plant Sci. 18(5):244-9. (Review)

"Henry A, Monéger F, Samal A, Martin OC. (2013)...". (2013)
Henry A, Monéger F, Samal A, Martin OC. (2013) Network function shapes network structure : the case of the Arabidopsis flower organ specification genetic network. Mol Biosyst. 2013 Jul 4 ;9(7):1726-35.

"Mirabet V, Besnard F, Vernoux T, Boudaoud A....". (2013)
Mirabet V, Besnard F, Vernoux T, Boudaoud A. (2012) Noise and robustness in phyllotaxis. PLoS Comput Biol. 2012 ;8(2):e1002389.

"Sassi M, Wang J, Ruberti I, Vernoux T, Xu J....". (2013)
Sassi M, Wang J, Ruberti I, Vernoux T, Xu J. (2013) Shedding light on auxin movement : Light-regulation of polar auxin transport in the photocontrol of plant development. Plant Signal Behav. 18 ;8(3). (Review)

"Sassi M, Vernoux T. (2013) Auxin and self-organiza". (2013)
Sassi M, Vernoux T. (2013) Auxin and self-organization at the shoot apical meristem. J Exp Bot. 2013 Jun ;64(9):2579-92. (Review)

"Traas J. (2013) Phyllotaxis. Development.140(2):24". (2013)
Traas J. (2013) Phyllotaxis. Development.140(2):249-53. (Review).

"Walker ML, Farcot E, Traas J, Godin C. (2013)...". (2013)
Walker ML, Farcot E, Traas J, Godin C. (2013) The flux-based PIN allocation mechanism can generate either canalyzed or diffuse distribution patterns depending on geometry and boundary conditions. PLoS One. 2013 ;8(1):e54802.

"Landrein B, Hamant O. How mechanical stress...". (2013)
Landrein B, Hamant O. How mechanical stress controls microtubule behavior and morphogenesis in plants : history, experiments and revisited theories. PLANT J. 75, 324-38

"Louveaux, M. and Hamant, O. (2013). The...". (2013)
Louveaux, M. and Hamant, O. (2013). The mechanics behind cell division. CURRENT OPINION IN PLANT BIOLOGY 16, 774.

"Hamant, O. (2013). Cell Biology : Cytoskeleton...". (2013)
Hamant, O. (2013). Cell Biology : Cytoskeleton Network Topology Feeds Back on Its Regulation. CURRENT BIOLOGY 23, R963.

"Hamant, O. (2013). Widespread mechanosensing...". (2013)
Hamant, O. (2013). Widespread mechanosensing controls the structure behind the architecture in plants. CURRENT OPINION IN PLANT BIOLOGY 16, 654.

"de Bossoreille de Ribou, S., Douam, F.,...". (2013)
de Bossoreille de Ribou, S., Douam, F., Hamant, O., Frohlich, M.W. and Negrutiu I. (2013). Plant science and agricultural productivity : why are we hitting the yield ceiling ? PLANT SCIENCE 210, 159.

"Hamant, O. (2013). Integrative Cell Biology ;...". (2013)
Hamant, O. (2013). Integrative Cell Biology ; Katanin at the Crossroads. CURRENT BIOLOGY 23, R206.

"Landrein, B., Lathe, R., Bringmann, M.,...". (2013)
Landrein, B., Lathe, R., Bringmann, M., Vouillot, C., Ivakov, A., Boudaoud, A., Persson, S., and Hamant, O. (2013). Impaired Cellulose Synthase Guidance Leads to Stem Torsion and Twists Phyllotactic Patterns in Arabidopsis. CURRENT BILOGY 23, 895.

"Bendahmane M, Dubois A, Raymond O, Le Bris M...". (2013)
Bendahmane M, Dubois A, Raymond O, Le Bris M (2013) Genetics and genomics of flower initiation and development in roses. J. Exp .Bot Feb ;64(4):847-57. doi : 10.1093/jxb/ers387

"Caillaud MC, Asai S, Rallapalli G, Piquerez...". (2013)
Caillaud MC, Asai S, Rallapalli G, Piquerez S, Fabro G, Jones JD. A downy mildew effector attenuates salicylic Acid-triggered immunity in Arabidopsis by interacting with the host mediator complex. PLoS Biol. 2013 Dec ;11(12):e1001732

"Hanzawa T, Shibasaki K, Numata T, Kawamura Y,...". (2013)
Hanzawa T, Shibasaki K, Numata T, Kawamura Y, Gaude T, Rahman A. 2013. Cellular auxin homeostasis under high temperature is regulated through a sorting NEXIN1-dependent endosomal trafficking pathway. Plant Cell. Sep ;25(9):3424-33


"Zelazny E, Santambrogio M, Pourcher M,...". (2013)
Zelazny E, Santambrogio M, Pourcher M, Chambrier P, Berne-Dedieu A, Fobis-Loisy I, Miege C, Jaillais Y, Gaude T#. 2013. Mechanisms governing the endosomal membrane recruitment of the core retromer in Arabidopsis. J Biol Chem Mar 29 ;288(13):8815-25

Wells, D. M., Laplaze, L., Bennett, M. J., & Vernoux, T. "Biosensors for phytohormone quantification : Challenges, solutions, and opportunities". Trends in Plant Science 5 244-249 (2013)
http://doi.org/10.1016/j.tplants.20...

Sassi, M., Wang, J., Ruberti, I., Vernoux, T., & Xu, J. "Shedding light on auxin movement : light-regulation of polar auxin transport in the photocontrol of plant development". Plant Signaling & Behavior 3 (2013)
http://doi.org/10.4161/psb.23355

Sassi, M., & Vernoux, T. "Auxin and self-organization at the shoot apical meristem". Journal of Experimental Botany 9 2579-2592 (2013)
http://doi.org/10.1093/jxb/ert101

Oliva, M., Farcot, E., & Vernoux, T. "Plant hormone signaling during development : insights from computational models". Current Opinion in Plant Biology 1 19-24 (2013)

Guédon, Y., Refahi, Y., Besnard, F., Farcot, E., Godin, C., & Vernoux, T. "Pattern identification and characterization reveal permutations of organs as a key genetically controlled property of post-meristematic phyllotaxis". Journal of Theoretical Biology 338 94-110 (2013)
http://doi.org/10.1016/j.jtbi.2013....

Galvan-Ampudia, C. S., Julkowska, M. M., Darwish, E., Gandullo, J., Korver, R. A., Brunoud, G., Haring M.A., Munnik T., Vernoux T., & Testerink, C. "Halotropism is a response of plant roots to avoid a saline environment". Current Biology 20 2044-2050 (2013)
http://doi.org/10.1016/j.cub.2013.08.042

2012

"Bringmann M, Landrein B, Schudoma C, Hamant...". (2012)
Bringmann M, Landrein B, Schudoma C, Hamant O, Hauser MT, Persson S. (2012) Cracking the elusive alignment hypothesis : the microtubule-cellulose synthase nexus unraveled. TRENDS PLANT SCI. 17, 666-74

"Vella, D., Ajdari, A., Vaziri, A. and...". (2012)
Vella, D., Ajdari, A., Vaziri, A. and Boudaoud, A. (2012). Indentation of ellipsoidal and cylindrical elastic shells. PHYSICAL REVIEW LETTERS 109, 144302.
Asnacios, A., Hamant, O. (2012). The mechanics behind cell polarity. TRENDS IN CELL BIOLOGY 22, 584.

"Alim, K., Hamant, O. and Boudaoud, A. (2012)....". (2012)
Alim, K., Hamant, O. and Boudaoud, A. (2012). Regulatory role of cell division rules on tissue growth heterogeneity. FRONTIERS IN PLANT SCIENCES 3,174.

"Proctor, S.A., Minc, N., Boudaoud, A. and...". (2012)
Proctor, S.A., Minc, N., Boudaoud, A. and Chang, F. (2012). Contributions of Turgor Pressure, the Contractile Ring, and Septum Assembly to Forces in Cytokinesis in Fission Yeast. CURRENT BIOLOGY 22, 1601.

"Nakayama, N., Smith, R.S., Mandel,T.,...". (2012)
Nakayama, N., Smith, R.S., Mandel,T., Robinson, S. , Kimura, S. , Boudaoud, A. and Kuhlemeier, C. (2012). Mechanical regulation of auxin-mediated growth. CURRENT BIOLOGY 22, 1468.

"Uyttewaal, M., Burian, A., Alim, K., Landrein,". (2012)
Uyttewaal, M., Burian, A., Alim, K., Landrein, B., Borowska-Wykret, D., Dedieu, A., Peaucelle, A., Ludynia, M., Traas, J., Boudaoud, A., Kwiatkowska, D. and Hamant, O. (2012) Mechanical Stress Acts via Katanin to Amplify Differences in Growth Rate between Adjacent Cells in Arabidopsis. CELL 149, 439.

"Uyttewaal, M., Burian, A., Alim, K., Landrein,". (2012)
Uyttewaal, M., Burian, A., Alim, K., Landrein, B., Borowska-Wykret, D., Dedieu, A., Peaucelle, A., Ludynia, M., Traas, J., Boudaoud, A., Kwiatkowska, D. and Hamant, O. (2012) Mechanical Stress Acts via Katanin to Amplify Differences in Growth Rate between Adjacent Cells in Arabidopsis. CELL 149, 439.

"Vella, D., Ajdari, A., Vaziri, A. and...". (2012)
Vella, D., Ajdari, A., Vaziri, A. and Boudaoud, A. (2012). The indentation of pressurized elastic shells : from polymeric capsules to yeast cells. JOURNAL OF THE ROYAL SOCIETY INTERFACE 9, 448.

"Mirabet, V., Besnard, F., Vernoux and T.,...". (2012)
Mirabet, V., Besnard, F., Vernoux and T., Boudaoud, A. (2012). Noise and robustness in phyllotaxis. PLOS COMPUTATIONAL BIOLOGY 8,e1002389.

"Dubois A., Carrere S., Raymond O., Pouvreau...". (2012)
Dubois A., Carrere S., Raymond O., Pouvreau B., Cottret L., Roccia A., Onesto J-P., Sakr S., Atanassova R., Baudino S., Foucher F., Le Bris M., Gouzy J. and Bendahmane M. (2012). Transcriptome database resource and gene expression atlas for the rose. BMC Genomics 20 ;13:638. PMID:23164410

"Bourbousse C., Ahmed I., Roudier F., Zabulon...". (2012)
Bourbousse C., Ahmed I., Roudier F., Zabulon G., Blondet E., Balzergue S., Colot V., Bowler C. and Barneche F. (2012). Histone H2B Monoubiquitination Facilitates the Rapid Modulation of Gene Expression during Arabidopsis Photomorphogenesis. PLoS Genet 8 : e1002825. PMID:22829781

"Pontier D., Picart C., Roudier F., Garcia D.,...". (2012)
Pontier D., Picart C., Roudier F., Garcia D., Lahmy S., Azevedo J., Alart E., Laudié M., Karlowski W. M., Cooke R., Colot V., Voinnet O. and Lagrange T. (2012). NERD, a plant-specific GW protein, defines an additional RNAi-dependent chromatin-based pathway in Arabidopsis. Mol. Cell 48 : 121-132. PMID:22940247. F1000 [4].

"Seifert M., Cortijo S., Colome-Tatche M.,...". (2012)
Seifert M., Cortijo S., Colome-Tatche M., Johannes F., Roudier F. and Colot V. (2012). MeDIP-HMM : Genome-wide identification of distinct DNA methylation states from high-density tiling arrays. Bioinformatics 28:2930-9. PMID:22989518

"Introduction to Genetic Analysis. Petunia...". (2012)
Introduction to Genetic Analysis. Petunia flowers (photo on the left : M. Vandenbussche) featured on the cover.

"Vialette-Guiraud A, Vandenbussche M (2012)....". (2012)
Vialette-Guiraud A, Vandenbussche M (2012). Evolution and development of the flower. Biologie Aujourd’hui 206 : 47-55.

"Reymond MC, Brunoud G, Chauvet A, Martinez-Garcia". (2012)
Reymond MC, Brunoud G, Chauvet A, Martinez-Garcia JF, Martin-Magniette M-L, Monéger F, Scutt CP (2012). A light-regulated genetic module was recruited to carpel development in Arabidopsis following a structural change to SPATULA. The Plant Cell 24 : 2812-2825.

"Heijmans K, Morel P, Vandenbussche M (2012)....". (2012)
Heijmans K, Morel P, Vandenbussche M (2012). MADS-box genes and floral development : the dark side. Journal of Experimental Botany 63(15):5397-404.

"Heijmans K, Ament K, Rijpkema AS, Zethof J,...". (2012)
Heijmans K, Ament K, Rijpkema AS, Zethof J, Wolters-Arts M, Gerats T, Vandenbussche M (2012). Redefining C and D in the Petunia ABC. The Plant Cell 24 : 2305-2317. Editorial commentary.

"Bonaccorso O, Lee JE, Puah L, Scutt CP, Golz...". (2012)
Bonaccorso O, Lee JE, Puah L, Scutt CP, Golz JF (2012). FILAMENTOUS FLOWER controls lateral organ development by acting as both an activator and repressor. BMC Plant Biology 12:176.


"Reymond MC, Brunoud G, Chauvet A, Martínez-Garcia". (2012)
Reymond MC, Brunoud G, Chauvet A, Martínez-Garcia JF, Martin-Magniette ML, Monéger F, Scutt CP. (2012) A light-regulated genetic module was recruited to carpel development in Arabidopsis following a structural change to SPATULA. Plant Cell. 2012 Jul ;24(7):2812-25

"Middleton AM, Farcot E, Owen MR, Vernoux T....". (2012)
Middleton AM, Farcot E, Owen MR, Vernoux T. (2012) Modeling regulatory networks to understand plant development : small is beautiful. Plant Cell. 24(10):3876-91. (review)

"Murray JA, Jones A, Godin C, Traas J. (2012)...". (2012)
Murray JA, Jones A, Godin C, Traas J. (2012) Systems analysis of shoot apical meristem growth and development : integrating hormonal and mechanical signaling. Plant Cell 24 (10):3907-19. (review)

"Band LR, Wells DM, Larrieu A, Sun J, Middleton". (2012)
Band LR, Wells DM, Larrieu A, Sun J, Middleton AM, French AP, Brunoud G, Sato EM, Wilson MH, Péret B, Oliva M, Swarup R, Sairanen I, Parry G, Ljung K, Beeckman T, Garibaldi JM, Estelle M, Owen MR, Vissenberg K, Hodgman TC, Pridmore TP, King JR, Vernoux T,* Bennett MJ.* (2012) Root gravitropism is regulated by a transient lateral auxin gradient controlled by a tipping-point mechanism. Proc Natl Acad Sci U S A. 2012 Mar 20 ;109(12):4668-73. (*corr authors)

"Brunoud G, Wells DM, Oliva M, Larrieu A,...". (2012)
Brunoud G, Wells DM, Oliva M, Larrieu A, Mirabet V, Burrow AH, Beeckman T, Kepinski S, Traas J, Bennett MJ, Vernoux T (2012) A novel sensor to map auxin response and distribution at high spatio-temporal resolution. Nature 482 : 103-106.

"Uyttewaal M, Burian A, Alim K, Landrein B,...". (2012)
Uyttewaal M, Burian A, Alim K, Landrein B, Borowska-Wykręt D, Dedieu A, Peaucelle A, Ludynia M, Traas J, Boudaoud A, Kwiatkowska D, Hamant O. (2012) A katanin-dependent microtubule response to mechanical stress enhances growth gradients between neighboring cells in Arabidopsis. Cell 149, 439-451

"Sassi M, Lu Y, Zhang Y, Wang J, Dhonukshe P,...". (2012)
Sassi M, Lu Y, Zhang Y, Wang J, Dhonukshe P, Blilou I, Dai M, Li J, Gong X, Jaillais Y, Yu X, Traas J, Ruberti I, Wang H, Scheres B, Vernoux T, Xu J. (2012) COP1 mediates the coordination of root and shoot growth by light through modulation of PIN1- and PIN2-dependent auxin transport in Arabidopsis. Development. 2012 Sep ;139(18):3402-12

"Bringmann M, Landrein B, Schudoma C, Hamant...". (2012)
Bringmann M, Landrein B, Schudoma C, Hamant O, Hauser MT, Persson S. (2012) Cracking the elusive alignment hypothesis : the microtubule-cellulose synthase nexus unraveled. TRENDS PLANT SCI. 17, 666-74

"Alim, K., Hamant, O. and Boudaoud, A. (2012)....". (2012)
Alim, K., Hamant, O. and Boudaoud, A. (2012). Regulatory role of cell division rules on tissue growth heterogeneity. FRONTIERS IN PLANT SCIENCES 3,174.

"Dubois A, Carrere S, Raymond O, Pouvreau B,...". (2012)
Dubois A, Carrere S, Raymond O, Pouvreau B, Cottret L, Roccia A, Onesto JP, Sakr S, Atanassova R, Baudino S, Foucher F, Le Bris M, Gouzy J, Bendahmane M. (2012) Transcriptome database resource and gene expression atlas for the rose. BMC Genomics 13:638

"Youssef Belkhadir,* Yvon Jaillais*, Petra...". (2012)
Youssef Belkhadir,* Yvon Jaillais*, Petra Epple, Emilia Balsemão-Pires, Jeffery L. Dangl and Joanne Chory. 2012 Brassinosteroids Modulate the Efficiency of Plant Immune Responses to Microbe-Associated Molecular Patterns. PNAS. 109:297-302

"Finet C and Jaillais Y. 2012. AUXOLOGY : when...". (2012)
Finet C and Jaillais Y. 2012. AUXOLOGY : when auxin meets plant evo-devo. Developmental Biology. 369(1), 19-31.

"Jaillais Y and Vert G. 2012 Brassinosteroids,...". (2012)
Jaillais Y and Vert G. 2012 Brassinosteroids, gibberellins and light-mediated signaling are the three-way controls of plant sprouting. Nature Cell Biology. 14(8), 788-790.

"Sassi M, Lu Y, Zhang Y, Wang J, Dhonukshe P,...". (2012)
Sassi M, Lu Y, Zhang Y, Wang J, Dhonukshe P, Blilou I, Dai M, Li J, Gong X, Jaillais Y, Yu X, Traas J, Ruberti I, Wang H, Scheres B, Vernoux T, Xu J. 2012. COP1 mediates the coordination of root and shoot growth by light through modulation of PIN1- and PIN2-dependent auxin transport in Arabidopsis. Development. 139(18), 3402-3412.

"Goubet P, Berges H, Bellec A, Gallina S,...". (2012)
Goubet P, Berges H, Bellec A, Gallina S, Fobis-Loisy I, Vekemans X, Castric V. 2012. Contrasted pattern of molecular evolution in dominant and recessive self-incompatibility haplotypes in Arabidopsis. PLoS Genetics. 8(3):e1002495. doi : 10.1371/journal.pgen.1002495.

Mirabet, V., Besnard, F., Vernoux, T.*, & Boudaoud, A.* "Noise and robustness in phyllotaxis". PLoS Computational Biology 2 (2012)
http://doi.org/10.1371/journal.pcbi...

Brunoud, G., Wells, D. M., Oliva, M., Larrieu, A., Mirabet, V., Burrow, A. H., Beeckman T., Kepinski S., Traas J., Bennett M.J., Vernoux, T. "A novel sensor to map auxin response and distribution at high spatio-temporal resolution". Nature 103–6 (2012)
http://doi.org/10.1038/nature10791

Band, L. R., Wells, D. M., Larrieu, A., Sun, J., Middleton, A. M., French, A. P., Brunoud G., Sato E.M., Wilson M.H., Peret B., Oliva M., Swarup R., Sairanen I., Parry G., Ljung K., Beeckman T., Garibaldi J.M., Estelle M., Owen M.R., Vissenberg K., Hodgman T.C., Pridmore T.P., King J.R., Vernoux T.*, Bennett M.J.* "Root gravitropism is regulated by a transient lateral auxin gradient controlled by a tipping-point mechanism". Proceedings of the National Academy of Sciences of the United States of America 12 4668–4673 (2012)
PMID : 22393022

Reymond, M. C., Brunoud, G., Chauvet, A., Martinez-Garcia, J. F., Martin-Magniette, M.-L., Moneger, F., & Scutt, C. P. "A Light-Regulated Genetic Module Was Recruited to Carpel Development in Arabidopsis following a Structural Change to SPATULA". The Plant Cell 7 2812–2825 (2012)
http://doi.org/10.1105/tpc.112.097915

Sassi, M., Lu, Y., Zhang, Y., Wang, J., Dhonukshe, P., Blilou, I., Dai M., Li J., Gong X., Jaillais Y., Yu X., Traas J., Ruberti I., Wang H., Scheres B., Vernoux T.*, & Xu, J.* "COP1 mediates the coordination of root and shoot growth by light through modulation of PIN1- and PIN2-dependent auxin transport in Arabidopsis". Development 18 3402-12 (2012)
http://doi.org/10.1242/dev.078212

Middleton, A. M., Farcot, E., Owen, M. R., & Vernoux, T. "Modeling Regulatory Networks to Understand Plant Development : Small Is Beautiful". Plant Cell 10 3876–3891 (2012)

2011

"Hamant O, Meyerowitz EM, Traas J. (2011) Is...". (2011)
Hamant O, Meyerowitz EM, Traas J. (2011) Is cell polarity under mechanical control in plants ? Plant Signal Behav. Jan 1 ;6(1)

"Hasson A, Plessis A, Blein T, Adroher B,...". (2011)
Hasson A, Plessis A, Blein T, Adroher B, Grigg S, Tsiantis M, Boudaoud A, Damerval C, Laufs P. (2011) Evolution and Diverse Roles of the CUP-SHAPED COTYLEDON Genes in Arabidopsis Leaf Development. Plant Cell 23(1):54-68.

"Vernoux T, Brunoud G, Farcot E, Morin V, Van...". (2011)
Vernoux T, Brunoud G, Farcot E, Morin V, Van den Daele H, Legrand J, Oliva M, Das P, Larrieu A, Wells D, Guédon Y, Armitage L, Picard F, Guyomarc’h S, Cellier C, Parry G, Koumproglou R, Doonan JH, Estelle M, Godin C, Kepinski S, Bennett M, De Veylder L, Traas J (2011) The auxin signalling network translates dynamic input into robust patterning at the shoot apex. Mol Syst Biol. 7:508.

"Mirabet V, Das P, Boudaoud A, Hamant O....". (2011)
Mirabet V, Das P, Boudaoud A, Hamant O. (2011) The role of mechanical forces in plant morphogenesis. Annu Rev Plant Biol. 62:365-85.

"Milani P, Gholamirad M, Traas J, Arnéodo A,...". (2011)
Milani P, Gholamirad M, Traas J, Arnéodo A, Boudaoud A, Argoul F, Hamant O.
(2011) In vivo analysis of local wall stiffness at the shoot apical meristem in Arabidopsis using atomic force microscopy. Plant J. 67(6):1116-23.

"Bayart E, Boudaoud A, Adda-Bedia M. (2011)...". (2011)
Bayart E, Boudaoud A, Adda-Bedia M. (2011) Finite-distance singularities in the tearing of thin sheets. Phys Rev Lett. 106(19):194301.

"Romanel E, Das P, Amasino RM, Traas J,...". (2011)
Romanel E, Das P, Amasino RM, Traas J, Meyerowitz E, Alves-Ferreira M. (2011) Reproductive Meristem22 is a unique marker for the early stages of stamen development. Int J Dev Biol. 55(6):657-64.

"Chopin J, Prevost A, Boudaoud A, Adda-Bedia...". (2011)
Chopin J, Prevost A, Boudaoud A, Adda-Bedia M. (2011) Crack Front Dynamics across a Single Heterogeneity. Phys Rev Lett. 107(14):144301.

"Vella D, Ajdari A, Vaziri A, Boudaoud A....". (2011)
Vella D, Ajdari A, Vaziri A, Boudaoud A. (2011) Wrinkling of pressurized elastic shells. (2011) Phys Rev Lett. 107(17):174301.

"Besnard F, Vernoux T, Hamant O. (2011)...". (2011)
Besnard F, Vernoux T, Hamant O. (2011) Organogenesis from stem cells in planta : multiple feedback loops integrating molecular and mechanical signals. Cell Mol Life Sci. 2011 Sep ;68(17):2885-906.

"Seizilles G, Bayart E, Adda-Bedia M, Boudaoud...". (2011)
Seizilles G, Bayart E, Adda-Bedia M, Boudaoud A. (2011) Bending waves in crumpled sheets. Phys Rev E Stat Nonlin Soft Matter Phys. 84(6-2):065602.

La Rota C, Chopard J, Das P, Paindavoine S, Rozier F, Farcot E, Godin C, Traas J, Monéger F "A data-driven integrative model of sepal primordium polarity in Arabidopsis". Plant Cell 23 4318-33 (2011)

"Dubois A., Remay A., Raymond O., Balzergue...". (2011)
Dubois A., Remay A., Raymond O., Balzergue S., Chauvet A., Maene M., Pécrix Y., Yang S.H., Jeauffre J., Thouroude T., Boltz V., Martin-Magniette M-L., Janczarski S., Legeai F., Renou J-P., Vergne P., Le Bris M., Foucher F. and Bendahmane M. (2011). Genomic approach to study floral development genes in Rosa sp. PLoS One 6:e28455. PMID:22194838

"Banaei A.M., Roudier F., Seifert M., Berard...". (2011)
Banaei A.M., Roudier F., Seifert M., Berard C., Magniette M.L., Ashtiyani R.K., Houben A., Colot V. and Mette M.F. (2011). Additive inheritance of histone modifications in Arabidopsis thaliana intra-specific hybrids. Plant J. 67, 691-700. PMID:21554454

"Bouyer D., Roudier F., Heese M., Ellen D....". (2011)
Bouyer D., Roudier F., Heese M., Ellen D. Andersen E. D., Gey D., Nowack M. K., Goodrich J., Renou J-P., Grini P. E., Colot V. and Schnittger A. (2011). Polycomb Repressive Complex 2 controls the embryo to seedling phase transition. PLoS Genet. 7 : e1002014.PMID:21423668. F1000 [1].

"Berger N., Dubreucq B., Roudier F., Dubos C....". (2011)
Berger N., Dubreucq B., Roudier F., Dubos C. and Lepiniec L. (2011). Transcriptional regulation of Arabidopsis LEAFY COTYLEDON2 involves RLE, a cis-element that regulates trimethylation of histone H3 at lysine-27. Plant Cell 23 : 4065-4078. PMID:22080598

"Roudier F.#, Ahmed I., Bérard C., Sarazin A.,...". (2011)
Roudier F.#, Ahmed I., Bérard C., Sarazin A., Mary-Huard T., Cortijo S., Bouyer D., Caillieux E., Duvernois-Berthet E., Al-Shikhley L., Giraut L., Despres B, Drevensek S., Barneche F., Dérozier S., Brunaud V., Aubourg S., Schnittger A., Bowler C., Martin-Magniette M-L., Robin S., Caboche M. and Colot V.# (2011). Integrative epigenomic mapping defines four major chromatin signatures in Arabidopsis. EMBO J. 30 : 1928−1938. # co-corresponding authors.PMID:21487388. F1000 [1].

"Vialette-Guiraud ACM, Alaux M, Legeai F,...". (2011)
Vialette-Guiraud ACM, Alaux M, Legeai F, Finet C, Chambrier P, Brown SC,
Chauvet A, Magdalena C, Rudall PJ, Scutt CP (2011) Cabomba as a model for studies of early angiosperm evolution. Annals of Botany 108 : 589-98.

"Vialette-Guiraud ACM, Adam H, Finet C,...". (2011)
Vialette-Guiraud ACM, Adam H, Finet C, Jasinski S, Jouannic S, Scutt CP (2011) Insights from ANA-grade angiosperms into the early evolution of CUP-SHAPED COTYLEDON genes. Annals of Botany107:1511-9

"Ronse De Craene L, Trehin C, Morel P,...". (2011)
Ronse De Craene L, Trehin C, Morel P, Negrutiu I (2011) Carpeloidy in flower evolution and diversification : a comparative study in Carica papaya and Arabidopsis thaliana. Annals of Botany 107 : 1453–1463.


"Vernoux T, Brunoud G, Farcot E, Morin V, Van...". (2011)
Vernoux T, Brunoud G, Farcot E, Morin V, Van den Daele H, Legrand J, Oliva M, Das P, Larrieu A, Wells D, Guedon Y, Armitage L, Picard F, Guyomarc’h S, Cellier C, Parry G, Koumproglou R, Doonan JH, Estelle M, Godin C, Kepinski S, Bennett M, De Veylder L, Traas J (2011) The auxin signalling network translates dynamic input into robust patterning at the shoot apex. Mol Syst Biol 7 : 508.

"Besnard F, Vernoux T, Hamant O (2011)...". (2011)
Besnard F, Vernoux T, Hamant O (2011) Organogenesis from stem cells in planta : multiple feedback loops integrating molecular and mechanical signals. Cell Mol Life Sci. 68(17) : 2885-906. (Review).

"Santuari L, Scacchi E, Rodriguez-Villalon A,...". (2011)
Santuari L, Scacchi E, Rodriguez-Villalon A, Salinas P, Dohmann EM, Brunoud G, Vernoux T, Smith RS, Hardtke CS. (2011) Positional information by differential endocytosis splits auxin response to drive Arabidopsis root meristem growth. Curr Biol. 21(22):1918-23.

"Milani P, Gholamirad M, Traas J, Arnéodo A,...". (2011)
Milani P, Gholamirad M, Traas J, Arnéodo A, Boudaoud A, Argoul F, Hamant O. (2011) In vivo analysis of local wall stiffness at the shoot apical meristem in Arabidopsis using atomic force microscopy. Plant J. 67(6):1116-1123.

"Besnard F, Vernoux T, Hamant O (2011)...". (2011)
Besnard F, Vernoux T, Hamant O (2011) Organogenesis from stem cells in planta : multiple feedback loops integrating molecular and mechanical signals. Cell Mol Life Sci. 68(17):2885-906. (Review).

"Romanel E, Das P, Amasino RM, Traas J,...". (2011)
Romanel E, Das P, Amasino RM, Traas J, Meyerowitz E, Alves-Ferreira M. (2011) Reproductive Meristem22 is a unique marker for the early stages of stamen development. Int J Dev Biol. 55(6):657-64.

"Santuari L, Scacchi E, Rodriguez-Villalon A,...". (2011)
Santuari L, Scacchi E, Rodriguez-Villalon A, Salinas P, Dohmann EM, Brunoud G, Vernoux T, Smith RS, Hardtke CS. (2011) Positional information by differential endocytosis splits auxin response to drive Arabidopsis root meristem growth. Curr Biol. 21(22):1918-23.

"Mirabet V, Das P, Boudaoud A, Hamant O....". (2011)
Mirabet V, Das P, Boudaoud A, Hamant O. (2011) The role of mechanical forces in plant morphogenesis. Annu Rev Plant Biol. 62:365-85.

"Smulders MJM, Arens P, Koning-Boucoiran CFS,...". (2011)
Smulders MJM, Arens P, Koning-Boucoiran CFS, Gitonga VW, Krens F, Atanassov A, Atanassov I, Rusanov KE, Bendahmane M, Dubois A, Raymond O, Caissard JC, Baudino S, Crespel L, Gudin S, Ricci SC, Kovatcheva N, Van Huylenbroeck J, Leus L, Wissemann V, Zimmermann H, Hensen I, Werlemark G, Nybom H. (2011) Genomic and Breeding Resources : Plantation and Ornamental Crops, Rose. C. Kole (ed.), Wild Crop Relatives : Genomic and Breeding Resources Plantation and Ornamental Crops , DOI 10.1007/978-3 -642-21201-7_12, # Springer-Verlag Berlin Heidelberg.

"Varaud E, Brioudes F, Szecsi J, Leroux J,...". (2011)
Varaud E, Brioudes F, Szecsi J, Leroux J, Brown S, Perrot-Rechenmann C and Bendahmane M (2011). AUXIN RESPONSE FACTOR8 regulates Arabidopsis petal growth by interacting with the bHLH transcription factor BIGPETALp. The Plant Cell 23 : 973–983.

"Dubois A, Remay A, Raymond O, Balzergue S,...". (2011)
Dubois A, Remay A, Raymond O, Balzergue S, Chauvet A, Maene M, Pécrix Y, Yang SH, Jeauffre J, Thouroude T, Boltz V, Martin-Magniette M-L, Jancza rski S, Legeai F, Renou JP, Vergne P, Le Bris M, Foucher F and Bendahm ane (2011). Genomic Approach to Study Floral Development Genes in Rosa sp. PLoS ONE 6(12) : e28455. doi:10.1371/journal.pone.0028455

"Jaillais Y*, Hothorn M*, Belkhadir Y, Dabi T,...". (2011)
Jaillais Y*, Hothorn M*, Belkhadir Y, Dabi T, Nimchuk ZL, Meyerowitz EM, and Chory J. 2011 Tyrosine phosphorylation controls brassinosteroid receptor activation by triggering membrane release of its kinase inhibitor. Genes and Development, 25, 232-7.

"Jaillais Y*, Belkhadir Y*, Balsemão-Pires E,...". (2011)
Jaillais Y*, Belkhadir Y*, Balsemão-Pires E, Dangl JL, Chory J. 2011 Extracellular leucine-rich repeats as a platform for receptor/coreceptor complex formation. PNAS. 17, 108, 8503-7.

"Keller MM, Jaillais Y, Pedmale UV, Moreno JE,...". (2011)
Keller MM, Jaillais Y, Pedmale UV, Moreno JE, Chory J, Ballaré CL. 2011 Cryptochrome 1 and phytochrome B control shade-avoidance responses in Arabidopsis via partially independent hormonal cascades. Plant Journal, 67, 195-207.

"Goubet P, Berges H, Bellec A, Gallina S,...". (2011)
Goubet P, Berges H, Bellec A, Gallina S, Fobis-Loisy I, Vekemans X, Castric V. 2011 Contrasted pattern of molecular evolution in dominant and recessive self-incompatibility haplotypes in Arabidopsis. PLoS Genetics. 8(3):e10022495

Besnard F., Vernoux T., & Hamant O. "Organogenesis from stem cells in planta : Multiple feedback loops integrating molecular and mechanical signals". Cellular and Molecular Life Sciences 17 2885–2906 (2011)
http://doi.org/10.1007/s00018-011-0732-4

Refahi, Y., Farcot, E., Guédon, Y., Besnard, F., Vernoux, T., & Godin, C. "A Combinatorial Model of Phyllotaxis Perturbations in Arabidopsis thaliana". Lecture Notes in Computer Science 323–335 Springer, Berlin, Heidelberg. (2011)
http://doi.org/10.1007/978-3-642-21...

Vernoux, T., Brunoud, G., Farcot, E., Morin, V., Van den Daele, H., Legrand, J., Oliva M., Das P., Larrieu A., Wells D., Guedon Y., Armitage L., Picard F., Guyomarc'h S., Cellier C., Parry G., Koumproglou R., Doonan J.H., Estelle M., Godin C., Kepinski S., Bennett M., De Veylder L., & Traas, J. "The auxin signalling network translates dynamic input into robust patterning at the shoot apex". Molecular Systems Biology 1 508 (2011)
http://doi.org/10.1038/msb.2011.39

Santuari, L., Scacchi, E., Rodriguez-Villalon, A., Salinas, P., Dohmann, E. M. N., Brunoud, G., Vernoux T., Smith R.S., & Hardtke, C. S. "Positional Information by Differential Endocytosis Splits Auxin Response to Drive Arabidopsis Root Meristem Growth". Current Biology 22 1918–1923 (2011)
http://doi.org/10.1016/j.cub.2011.10.002

2010

"Hamant O, Traas J (2010) The mechanics behind...". (2010)
Hamant O, Traas J (2010) The mechanics behind plant development – Tansley review. New Phytol.185(2):369-85.

"Hamant O, Pautot V. (2010) Plant development :...". (2010)
Hamant O, Pautot V. (2010) Plant development : a TALE story. C R Biol. 333(4):371-81.

"Fernandez R, Das P, Mirabet V, Moscardi E,...". (2010)
Fernandez R, Das P, Mirabet V, Moscardi E, Traas J, Verdeil JL, Malandain G, Godin C. (2010) Imaging plant growth in 4D : robust tissue reconstruction and lineaging at cell resolution. Nat Methods. 7(7):547-53.

"Boudaoud A. (2010) An introduction to the...". (2010)
Boudaoud A. (2010) An introduction to the mechanics of morphogenesis for plant biologists. Trends Plant Sci. 15(6):353-60.

"Cadot O, Touzé C, Boudaoud A. (2010) Linear...". (2010)
Cadot O, Touzé C, Boudaoud A. (2010) Linear versus nonlinear response of a forced wave turbulence system. Phys Rev E Stat Nonlin Soft Matter Phys. 82(4 Pt 2):046211.

"Hamant O, Traas J, Boudaoud A. (2010)...". (2010)
Hamant O, Traas J, Boudaoud A. (2010) Regulation of shape and patterning in plant development. Curr Opin Genet Dev. 20(4):454-9.

"Heisler MG, Hamant O, Krupinski P, Uyttewaal...". (2010)
Heisler MG, Hamant O, Krupinski P, Uyttewaal M, Ohno C, Jönsson H, Traas J, Meyerowitz EM. (2010) Alignment between PIN1 polarity and microtubule orientation in the shoot apical meristem reveals a tight coupling between morphogenesis and auxin transport. PLoS Biol. 8(10):e1000516.

"Dubois A., Raymond O., Maene M., Baudino S.,...". (2010)
Dubois A., Raymond O., Maene M., Baudino S., Langlade N.B., Boltz V., Vergne P. and Bendahmane M. (2010). Tinkering with the C-function : a molecular frame for the selection of double flowers in cultivated roses. PLoS One 18:e9288. PMID:20174587

"Roudier F., Gissot L., Beaudoin F., Haslam...". (2010)
Roudier F., Gissot L., Beaudoin F., Haslam R., Michaelson L., Marion J., Molino D., Lima A., Bach L., Morin H., Tellier F., Palauqui J-C., Bellec Y., Renne C., Miquel M., Dacosta M., Vignard J., Rochat C., Markham J.E., Moreau P., Napier J. and Faure J-D. (2010). Very-long-chain fatty acids are involved in polar auxin transport and developmental patterning in Arabidopsis. Plant Cell 22:364-75.PMID:20145257. F1000 [2].

"Vialette-Guiraud A, Scutt CP (2010) Carpel...". (2010)
Vialette-Guiraud A, Scutt CP (2010) Carpel evolution, in : Fruit Development and Seed Dispersal (editor : Lars Ostergaard), Annual Plant Reviews 38, pages 1-34.

"Vandenbussche M, Rijpkema AS, Koes R,...". (2010)
Vandenbussche M, Rijpkema AS, Koes R, Heijmans K, Gerats T (2010) Variations on a theme : changes in the floral ABCs in angiosperms. Semin Cell Dev Biol 21 : 100-107.

"Tavares R, Cagnon M, Negrutiu I, Mouchiroud D...". (2010)
Tavares R, Cagnon M, Negrutiu I, Mouchiroud D (2010) Testing the recent theories for the origin of the hermaphrodite flower by comparison of the transcriptomes of gymnosperms and angiosperms. BMC Evolutionary Biology 10:240-248.

"Jasinski S, Vialette-Guiraud A, Scutt CP...". (2010)
Jasinski S, Vialette-Guiraud A, Scutt CP (2010) The evolutionary-developmental analysis of plant microRNAs. Philosophical Transactions of the Royal Society of London, Series-B 365 : 469-76.

"Finet C, Fourquin C, Vinauger M, Berne-Dedieu...". (2010)
Finet C, Fourquin C, Vinauger M, Berne-Dedieu A, Chambrier P, Paindavoine S, Scutt CP (2010) Parallel structural evolution of Auxin Response Factors in the angiosperms. Plant Journal 63:952-959.

"Ferrandiz C, Fourquin C, Prunet N, Scutt CP,...". (2010)
Ferrandiz C, Fourquin C, Prunet N, Scutt CP, Sundberg E, Trehin C, Vialette-Guiraud AC (2010) Carpel development. Advances in Botanical Research 55 : 1-73.

"Cast D, Cock JM, Kloareg B, Menand B, Michel...". (2010)
Cast D, Cock JM, Kloareg B, Menand B, Michel G, Retaux S, Scutt CP, Vialette-Guiraud ACM (2010) Des modèles pour comprendre l’évolution du développement des eucaryotes. Biofutur 314 : 30-33.

"Hamant O, Traas J (2010) The mechanics behind...". (2010)
Hamant O, Traas J (2010) The mechanics behind plant development – Tansley review. New Phytol.185(2):369-85.

"Hamant O, Pautot V. (2010) Plant development :...". (2010)
Hamant O, Pautot V. (2010) Plant development : a TALE story. C R Biol. 333(4):371-81.

"Fernandez R, Das P, Mirabet V, Moscardi E,...". (2010)
Fernandez R, Das P, Mirabet V, Moscardi E, Traas J, Verdeil JL, Malandain G, Godin C. (2010) Imaging plant growth in 4D : robust tissue reconstruction and lineaging at cell resolution. Nat Methods. 7(7):547-53.

"Boudaoud A. (2010) An introduction to the...". (2010)
Boudaoud A. (2010) An introduction to the mechanics of morphogenesis for plant biologists. Trends Plant Sci. 15(6):353-60.

"Cadot O, Touzé C, Boudaoud A. (2010) Linear...". (2010)
Cadot O, Touzé C, Boudaoud A. (2010) Linear versus nonlinear response of a forced wave turbulence system. Phys Rev E Stat Nonlin Soft Matter Phys. 82(4 Pt 2):046211.

"Hamant O, Traas J, Boudaoud A. (2010)...". (2010)
Hamant O, Traas J, Boudaoud A. (2010) Regulation of shape and patterning in plant development. Curr Opin Genet Dev. 20(4):454-9.

"Heisler MG, Hamant O, Krupinski P, Uyttewaal...". (2010)
Heisler MG, Hamant O, Krupinski P, Uyttewaal M, Ohno C, Jönsson H, Traas J, Meyerowitz EM. (2010) Alignment between PIN1 polarity and microtubule orientation in the shoot apical meristem reveals a tight coupling between morphogenesis and auxin transport. PLoS Biol. 8(10):e1000516.

"Vergne P, Maene M, Chauvet A, Debener T and...". (2010)
Vergne P, Maene M, Chauvet A, Debener T and Bendahmane M. (2010) Versatile somatic embryogenesis systems and transformation methods for the diploid rose genotype Rosa chinensis cv Old Blush. Plant Cell Tiss Organ Cult 100 : 73–81

"Dubois A, Raymond O, Maene M, Baudino S,...". (2010)
Dubois A, Raymond O, Maene M, Baudino S, Langlade NB, Boltz V, Vergne P and Bendahmane M (2010) Tinkering with the C-function : A molecular frame for the selection of double flowers in cultivated roses. PLoS ONE 5(2) : e9288. doi:10.1371/journal.pone.0009288

Vernoux, T., Besnard, F., & Traas, J. "Auxin at the shoot apical meristem". Cold Spring Harbor Perspectives in Biology 4 (2010)
http://doi.org/10.1101/cshperspect....

Gaamouche, T., Manes, C.-L. de O., Kwiatkowska, D., Berckmans, B., Koumproglou, R., Maes, S., Beeckman T., Vernoux T., Doonan J.H., Traas J., Inze D., & De Veylder, L. "Cyclin-dependent kinase activity retains the shoot apical meristem cells in an undifferentiated state". The Plant Journal 1 26-37 (2010)
http://doi.org/10.1111/j.1365-313X....

Bashandy, T., Guilleminot, J., Vernoux, T., Caparros-Ruiz, D., Ljung, K., Meyer, Y., & Reichheld, J.-P. "Interplay between the NADP-Linked Thioredoxin and Glutathione Systems in Arabidopsis Auxin Signaling". Plant Cell 2 376–391 (2010)
http://doi.org/10.1105/tpc.109.071225

De Rybel, B., Vassileva, V., Parizot, B., Demeulenaere, M., Grunewald, W., Audenaert, D., Van Campenhout J., Overvoorde P., Jansen L., Vanneste S., Moller B., Wilson M., Holman T., Van Isterdael G., Brunoud G., Vuylsteke M., Vernoux T., De Veylder L., Inze D., Weijers D., Bennett M.J., & Beeckman, T. "A Novel Aux/IAA28 Signaling Cascade Activates GATA23-Dependent Specification of Lateral Root Founder Cell Identity". Current Biology 19 1697–1706 (2010)
http://doi.org/10.1016/j.cub.2010.09.007

Traas, J., & Vernoux, T. "Oscillating Roots". Science 5997 1290–1291 (2010)
http://doi.org/10.1126/science.1195572

Sozzani, R., Cui, H., Moreno-Risueno, M. a, Busch, W., Van Norman, J. M., Vernoux, T., Brady S.M., Dewitte W., Murray J.A., & Benfey, P. N. "Spatiotemporal regulation of cell-cycle genes by SHORTROOT links patterning and growth". Nature 7302 128–132 (2010)
http://doi.org/10.1038/nature09143

Fernandez R, Das P, Mirabet V, Moscardi E, Traas J, Verdeil JL, Malandain G, Godin C. "Imaging plant growth in 4D : robust tissue reconstruction and lineaging at cell resolution.". Nat Methods. 7 547-53 (2010)



2009

"Das, P., Toshiro Ito, Frank Wellmer, Teva...". (2009)
Das, P., Toshiro Ito, Frank Wellmer, Teva Vernoux, Annick Dedieu, Jan Traas, Elliot M. Meyerowitz (2009). Floral stem cell termination involves the direct regulation of AGAMOUS by PERIANTHIA. Development 136, 1605-1611

"Traas J, Hamant O (2009) From genes to shape :...". (2009)
Traas J, Hamant O (2009) From genes to shape : understanding the control of morphogenesis at the shoot meristem in higher plants using systems biology. C R Biol. 332 : 974-985.

"Corson F, Hamant O, Bohn S, Traas J, Boudaoud...". (2009)
Corson F, Hamant O, Bohn S, Traas J, Boudaoud A, Couder Y (2009). Turning a plant tissue into a living cell froth through isotropic growth. Proc Natl Acad Sci USA 106:8453-8458

"Uyttewaal M, Traas J, Hamant O (2009)...". (2009)
Uyttewaal M, Traas J, Hamant O (2009) Integrating physical stress, growth, and development. Curr Opin Plant Biol. 13(1):46-52.

"Teixeira F.K., Heredia F., Sarazin A.,...". (2009)
Teixeira F.K., Heredia F., Sarazin A., Roudier F., Boccara M., Ciaudo C., Cruaud C., Poulain J., Berdasco M., Fraga M.F., Voinnet O., Wincker P., Esteller M. and Colot V. (2009). A role for RNAi in the selective correction of DNA methylation defects.Science 323, 1600-1604. PMID:19179494. Perspective in Science.

"Bérard C., Martin-Magniette M.-L., To A.,...". (2009)
Bérard C., Martin-Magniette M.-L., To A., Roudier F., Colot V. and Robin S. (2009). Mélanges gaussiens bidimensionnels pour la comparaison de deux échantillons de chromatine immunoprécipitée. La revue Modulad 40, 53-68.

"Roudier F.#, Teixeira F.K.# and Colot V....". (2009)
Roudier F.#, Teixeira F.K.# and Colot V. (2009). Chromatin indexing in Arabidopsis : an epigenomic tale of tails and more. Trends Genet. 25:511-7. # Equal contribution. PMID:19850370

"Vandenbussche M, Horstman A, Zethof J, Koes...". (2009)
Vandenbussche M, Horstman A, Zethof J, Koes R, Rijpkema AS, Gerats T (2009) Differential recruitment of WOX transcription factors for lateral development and organ fusion in Petunia and Arabidopsis.Plant Cell 21 : 2269-2283.



"Rijpkema AS, Zethof J, Gerats T, Vandenbussche M". (2009)
Rijpkema AS, Zethof J, Gerats T, Vandenbussche M (2009) The petunia AGL6 gene has a SEPALLATA-like function in floral patterning. Plant Journal 60 : 1-9.

"Rijpkema AS, Zethof J, Gerats T, Vandenbussche M". (2009)
Rijpkema AS, Zethof J, Gerats T, Vandenbussche M (2009) Evolution and Development of the Flower. In : Gerats T and Strommer J, editors, Petunia - Evolutionary, Developmental and Physiological Genetics.. Springer Life Sciences, 2nd. ed., pages199-224.

"Prunet N, Morel P, Negrutiu I, Trehin C...". (2009)
Prunet N, Morel P, Negrutiu I, Trehin C (2009) Time to stop : flower meristem termination. Plant Physiology 150 : 1764-1772.

"Moyroud E, Reymond M, Parcy F, Scutt CP...". (2009)
Moyroud E, Reymond M, Parcy F, Scutt CP (2009) The analysis of entire gene promoters by Surface Plasmon Resonance. Plant Journal 59 : 851-858.

"Morel P, Trehin C, Breuil-Broyer S and...". (2009)
Morel P, Trehin C, Breuil-Broyer S and Negrutiu I (2009) Altering FVE/MSI4 results in a substantial increase of biomass in Arabidopsis—the functional analysis of an ontogenesis accelerator. Molecular Breeding 23 : 239-257.

"Das, P., Toshiro Ito, Frank Wellmer, Teva...". (2009)
Das, P., Toshiro Ito, Frank Wellmer, Teva Vernoux, Annick Dedieu, Jan Traas, Elliot M. Meyerowitz (2009). Floral stem cell termination involves the direct regulation of AGAMOUS by PERIANTHIA. Development 136, 1605-1611

"Traas J, Hamant O (2009) From genes to shape :...". (2009)
Traas J, Hamant O (2009) From genes to shape : understanding the control of morphogenesis at the shoot meristem in higher plants using systems biology. C R Biol. 332 : 974-985.

"Corson F, Hamant O, Bohn S, Traas J, Boudaoud...". (2009)
Corson F, Hamant O, Bohn S, Traas J, Boudaoud A, Couder Y (2009). Turning a plant tissue into a living cell froth through isotropic growth. Proc Natl Acad Sci USA 106:8453-8458

"Uyttewaal M, Traas J, Hamant O (2009)...". (2009)
Uyttewaal M, Traas J, Hamant O (2009) Integrating physical stress, growth, and development. Curr Opin Plant Biol. 13(1):46-52.

"Kheyr-Pour, A., Bendahmane, M., Matzeit, V.,...". (2009)
Kheyr-Pour, A., Bendahmane, M., Matzeit, V., Accotto, G.P., Crespi, S. and Gronenborn, B. (1991) Tomato yellow leaf curl virus from Sardinia is a whitefly-transmitted monopartite geminivirus. Nucl. Acids Res. 19 : 6763-6769.

"Bendahmane M., Schalk, H.-J. and Gronenborn...". (2009)
Bendahmane M., Schalk, H.-J. and Gronenborn B. (1995). Identification and characterization of Wheat Dwarf Virus from France using a rapid method for geminivirus DNA preparation. Phytopathology 95 : 1449-1455.

"Bendahmane M. and Gronenborn B. (1997)....". (2009)
Bendahmane M. and Gronenborn B. (1997). Engineering resistance against tomato yellow leaf curl virus (TYLCV) using antisense RNA. Plant Mol. Biol. 33 : 351-357.

"Bendahmane M., Fitchen J.H., Zang G. and...". (2009)
Bendahmane M., Fitchen J.H., Zang G. and Beachy R.N. (1997) Studies of coat protein-mediated resistance to tobacco mosaic tobamovirus : Correlation between assembly of mutant coat protein and resistance. J. Virology 71 : 7942-7950.

"*Lewis KJ, *Bendahmane M, Smith TJ, Beachy...". (2009)
*Lewis KJ, *Bendahmane M, Smith TJ, Beachy RN, Siuzdak, G (1998) Identification of viral mutants by mass spectrometry. Proc Nat Acad Sci USA 95 : 8596-8601 (*First co-authors).

"Bendahmane M, Beachy RN (1999) Control of...". (2009)
Bendahmane M, Beachy RN (1999) Control of tobamovirus infection via pathogen-derived resistance. Advances in Virus Research 53 : 369-386

"Bendahmane M, Koo M, Karrer E, Beachy RN...". (2009)
Bendahmane M, Koo M, Karrer E, Beachy RN (1999) Display of epitopes on the suface if tobacco mosaic virus : Impact of charge and isoelectric point of the epitope on virus-host interactions. J Mol Biol 290 : 9-20

"*Koo M, *Bendahmane M, Latteirri G, Paoletti...". (2009)
*Koo M, *Bendahmane M, Latteirri G, Paoletti E, Fitchen J, Buchmeier M, Beachy RN (1999) Protective immunity against murine hepatitis virus induced by intranasal and subcutaneous administration of hybrids of tobacco mosaic virus that carries and MHV epitope. Proc Nat Acad Sci USA 96 : 7774-7779 (*First co-authors).

"Szecsi J, Ding X, Lim CO, Bendahmane M, MJ...". (2009)
Szecsi J, Ding X, Lim CO, Bendahmane M, MJ Cho, Nelson RS, RN Beachy (1999) Development of the tobacco mosaic virus infection site in Nicotiana benthamiana. Mol Plant-Microbe Interact 12 : 143-152

"Gilleland HE, Gilleland LB, Staczek J, Harty...". (2009)
Gilleland HE, Gilleland LB, Staczek J, Harty RN, Garcia-Sastre A, Palese P, Brennan FR, Hamilton WDO, Bendahmane M, Beachy RN (2000) Chimeric animal and plant viruses expressing epitopes of outer membrane protein F as a combined vaccine against Pseudomonas aeruginosa lung infection. FEMS Immunology and Medical Microbiology 27 : 291-297

"Staczek J, Bendahmane M, Gilleland LB, Beachy...". (2009)
Staczek J, Bendahmane M, Gilleland LB, Beachy RN, Gilleland HJ (2000) Immunization with a chimeric Tobacco Mosaic Virus containing an epitope of Outer Membrane protein F of Pseudomonas aeruginosa provides protection against challenge with P. aeruginosa. Vaccine 18 : 2266-2274

"Bendahmane M, Szecsi J, Chen I, Berg HG,...". (2009)
Bendahmane M, Szecsi J, Chen I, Berg HG, Beachy RN (2002) Characterization of mutant tobacco mosaic virus coat protein which interferes with virus cell to cell movement. Proc. Natl. Acad. Sci. USA 99 : 3645–3650

"Scalliet G., Journot N., Jullien F., Baudino...". (2009)
Scalliet G., Journot N., Jullien F., Baudino S., Magnard J-L., Channeliere S., Vergne P., Dumas C., Bendahmane M., Cock J.M., Hugueney P. (2002) Biosynthesis of the major scent components 3,5-dimethoxytoluene and 1,3,5-trimethoxybenzene by novel rose O-methyltransferases. FEBS Letters 523 : 113-118.

"Rieseberg L.H., Raymond O., Rosenthal D.M.,...". (2009)
Rieseberg L.H., Raymond O., Rosenthal D.M., Lai Z., Livingstone K., Nakazato T., Durphy J.L., Schwarzbach A.E., Donovan L.A. and Lexer C. (2003). Major ecological transitions in wild sunflowers facilitated by hybridization. Science 301 : 1211-1216.

"Lefkir Y., De Chassey B., Dubois A., Bogdanovic". (2009)
Lefkir Y., De Chassey B., Dubois A., Bogdanovic A., Brady RJ., Destaing O., Bruckert F.,O’Halloran TJ., Cosson P., Letourneur F. (2003) The AP-1 Clathrin-adaptor Is Required for LysosomalEnzymes Sorting and Biogenesis of the Contractile Vacuole Complex in Dictyostelium Cells. Mol Biol Cell. 14 : 1835-51.

"Lexer C., Welch M.E., Raymond O. and Rieseberg". (2009)
Lexer C., Welch M.E., Raymond O. and Rieseberg L.H. (2003). The origin of ecological divergence in Helianthus paradoxus (Asteraceae) : selection on transgressive characters in a novel hybrid habitat. Int J Org Evolution 57 : 1989-2000.

"Lexer C., Rosenthal D.M., Raymond O., Donovan...". (2009)
Lexer C., Rosenthal D.M., Raymond O., Donovan L.A., Rieseberg L.H. (2005). Genetics of species differences in the wild annual sunflowers, Helianthus annuus and Helianthus petiolaris. Genetics 169 : 2225-2239.

"Channeliere S, Riviere S, Scalliet G, Szecsi...". (2009)
Channeliere S, Riviere S, Scalliet G, Szecsi J, Jullien F, Dolle C, Vergne P, Dumas C, Bendahmane M, Hugueney P, Cock JM (2002) Analysis of gene expression in rose petals using expressed sequence tags. FEBS Letters 515 : 35-38.

"Wellmer F, M Alves-Ferreira, A. Dubois, JL...". (2009)
Wellmer F, M Alves-Ferreira, A. Dubois, JL Riechmann, and EM Meyerowitz. (2006) Genome-Wide Analysis of Gene Expression during Early Arabidopsis Flower Development. PLoS Genetics, 2 : 1012-1024

"Szécsi J, Joly C, Bordji K, Varaud E, Cock JM,...". (2009)
Szécsi J, Joly C, Bordji K, Varaud E, Cock JM, Dumas C, Bendahmane M. (2006). BIGPETALp, a bHLH transcription factor is involved in the control of Arabidopsis petal size. EMBO J. 25 : 3912-3920.

"Bendahmane M, Chen I, Asurmendi S, Bazzini AA...". (2009)
Bendahmane M, Chen I, Asurmendi S, Bazzini AA Szecsi J, Beachy RN (2007) Coat protein-mediated resistance to TMV infection of Nicotiana tabacum involves multiple modes of interference by coat protein. Virology 366 : 107-116.

"Asurmendi S, Berg RH Smith TJ, Bendahmane M,...". (2009)
Asurmendi S, Berg RH Smith TJ, Bendahmane M, Beachy RN (2007) Aggregation of TMV CP plays a role in CP functions and in coat-protein-mediated resistance. Virology 366 : 98-106

"Scalliet G, Piola F, Douady CJ, Réty S,...". (2009)
Scalliet G, Piola F, Douady CJ, Réty S, Raymond O, Baudino S, Bordji K, Bendahmane M, Dumas C, Cock JM, Hugueney P (2008) Scent evolution in Chinese roses. Proc Natl Acad Sci USA 105 : 5927–5932

"Brioudes F, Joly C, Szécsi J, Varaud E, Leroux...". (2009)
Brioudes F, Joly C, Szécsi J, Varaud E, Leroux J, Bellvert F, Bertrand C and Bendahmane M. (2009) Jasmonate controls late development stages of petal growth in Arabidopsis thaliana. Plant J 60 : 1070–1080.

"Brioudes F, Thierry A-M, Chambrier P,...". (2009)
Brioudes F, Thierry A-M, Chambrier P, Mollereau B and Bendahmane M (2010) Translationally controlled tumor protein is a conserved mitotic growth integrator in animals and plants. Proc. Natl. Acad. Sci. USA 107 : 16384-16389.

Das P, Ito T, Wellmer F, Vernoux T, Dedieu A, Traas J, Meyerowitz EM "Floral stem cell termination involves the direct regulation of AGAMOUS by PERIANTHIA". Development 10 1605-1611 (2009)
PMID : 19395638

2008

"Hamant O., Heisler MG., Jonsson H., Krupinski...". (2008)
Hamant O., Heisler MG., Jonsson H., Krupinski P., Uyttewaal M., Bokov P., Corson F., Sahlin P., Boudaoud A., Meyerowitz EM., Couder Y., Traas J. (2008) Developmental patterning by mechanical signals in Arabidopsis. Science 322 (5908), 1650-1655

"Vandenbussche M, Janssen A, Zethof J, van...". (2008)
Vandenbussche M, Janssen A, Zethof J, van Orsouw N, Peters J, van Eijk MJ, Rijpkema AS, Schneiders H, Santhanam P, de Been M, van Tunen A, Gerats T (2008) Generation of a 3D indexed Petunia insertion database for reverse genetics. Plant Journal 54 : 1105-1114.

"Prunet N, Morel P, Thierry A-M, Eshed Y,...". (2008)
Prunet N, Morel P, Thierry A-M, Eshed Y, Bowman J, Negrutiu I and Trehin C (2008) The REBELOTE, SQUINT and ULTRAPETALA1 genes function redundantly in the temporal regulation of floral meristem termination in Arabidopsis thaliana. Plant Cell 20 : 901-919.

"Hamant O., Heisler MG., Jonsson H., Krupinski...". (2008)
Hamant O., Heisler MG., Jonsson H., Krupinski P., Uyttewaal M., Bokov P., Corson F., Sahlin P., Boudaoud A., Meyerowitz EM., Couder Y., Traas J. (2008) Developmental patterning by mechanical signals in Arabidopsis. Science 322 (5908), 1650-1655

2007

"Turck F. #, Roudier F.#, Farrona S., Martin-Magnie". (2007)
Turck F. #, Roudier F.#, Farrona S., Martin-Magniette M-L., Guillaume E., Buisine N., Gagnot S., Martienssen R., Coupland G. and Colot V. (2007). Arabidopsis TFL2/LHP1 Specifically Associates with Genes through Recognition of the Chromatin Mark H3K27me3. PLoS Genet. 3, e86. # Co-first authors. PMID:17542647. F1000 [2].

"Scutt CP, Theissen G, Ferrandiz C (2007) The...". (2007)
Scutt CP, Theissen G, Ferrandiz C (2007) The evolution of plant development : past present and future. Annals of Botany 100 : 599-601

"Rijpkema A, Gerats T, Vandenbussche M (2006)...". (2007)
Rijpkema A, Gerats T, Vandenbussche M (2006) Genetics of floral development in Petunia. Advances in Botanical Research 44 : 237-278.

"Rijpkema AS, Gerats T, Vandenbussche M (2007)...". (2007)
Rijpkema AS, Gerats T, Vandenbussche M (2007) Evolutionary complexity of MADS complexes. Curr Opin Plant Biol 10 : 32-38.

"Fourquin C, Vinauger-Douard M, Chambrier P,...". (2007)
Fourquin C, Vinauger-Douard M, Chambrier P, Berne-Dedieu A, Scutt CP (2007) Functional conservation between CRABS CLAW orthologues from widely diverged angiosperms. Annals of Botany 100 : 651-657.


"Cartolano M, Castillo R, Efremova N, Kuckenberg". (2007)
Cartolano M, Castillo R, Efremova N, Kuckenberg M, Zethof J, Gerats T, Schwarz-Sommer Z, Vandenbussche M (2007) A conserved microRNA module exerts homeotic control over Petunia hybrida and Antirrhinum majus floral organ identity. Nat Genet 39 : 901-905.


Djian-Caporalino C, Fazari A, Arguel MJ, Vernie T, VandeCasteele C, Faure I, Brunoud G, Pijarowski L, Palloix A, Lefebvre V, Abad P "Root-knot nematode (Meloidogyne spp.) Me resistance genes in pepper (Capsicum annuum L.) are clustered on the P9 chromosome". Theoretical and Applied Genetics 3 473-486 (2007)
PMID : 17136373

Cui H, Levesque MP*, Vernoux T*, Jung JW, Paquette AJ, Gallagher KL, Wang JY, Blilou I, Scheres B, Benfey PN "An evolutionarily conserved mechanism delimiting SHR movement defines a single layer of endodermis in plants". Science 421-425 (2007)
PMID : 17446396

2006

"Wellmer F., Alves-Ferreira M., Dubois A.,...". (2006)
Wellmer F., Alves-Ferreira M., Dubois A., Riechmann J.L. and Meyerowitz E.M. (2006). Genome-wide analysis of gene expression during early Arabidopsis flower development. PLoS Genet. 2:e117. PMID:16789830

"Smyczynski C., Roudier F., Gissot L.,...". (2006)
Smyczynski C., Roudier F., Gissot L., Vaillant E., Grandjean O., Morin H., Masson T., Bellec Y., Geelen D. and Faure J-D. (2006). The C-terminus of the immunophilin PASTICCINO1 is required for plant development and for interaction with a NAC-like transcription factor. J. Biol. Chem. 281:25475-84. PMID:16803883

"Scutt CP, Vinauger-Douard M, Fourquin C,...". (2006)
Scutt CP, Vinauger-Douard M, Fourquin C, Finet C, Dumas C (2006) An evolutionary perspective on the regulation of carpel development. J Exp Bot 57 : 2142-2152.

"Zluvova J, Nicolas M, Berger A, Negrutiu I,...". (2006)
Zluvova J, Nicolas M, Berger A, Negrutiu I, and Monéger F (2006) Sex determination and premature arrest of male flower meristem in the dioecious plant Silene latifolia. PNAS 103 : 18854-18859.

"Rijpkema AS, Royaert S, Zethof J, van der...". (2006)
Rijpkema AS, Royaert S, Zethof J, van der Weerden G, Gerats T, Vandenbussche M (2006) Analysis of the Petunia TM6 MADS box gene reveals functional divergence within the DEF/AP3 lineage. Plant Cell 18 : 1819-1832.


Levesque MP*, Vernoux T*, Busch W, Cui H, Wang JY, Blilou I, Hassan H, Nakajima K, Matsumoto N, Lohmann JU, Scheres B, Benfey PN "Whole-genome analysis of the SHORT-ROOT developmental pathway in Arabidopsis". PLoS Biology 5 (2006)
PMID : 16640459

2005-2010

"Jaillais Y, Fobis-Loisy I, Miège C, Rollin C,...". (2005-2010)
Jaillais Y, Fobis-Loisy I, Miège C, Rollin C, Gaude T. 2006 AtSNX1 defines an endosome for auxin-carrier trafficking in Arabidopsis. Nature, 443, 106-109

"Jaillais Y, Santambrogio M, Rozier F,...". (2005-2010)
Jaillais Y, Santambrogio M, Rozier F, Fobis-Loisy I, Miège C, Gaude T. 2007 The retromer protein VPS29 links cell polarity and organ initiation in plants. Cell, 130, 1057-1070

"Jaillais Y, Fobis-Loisy I, Miège C, Gaude T....". (2005-2010)
Jaillais Y, Fobis-Loisy I, Miège C, Gaude T. 2008 Evidence for a sorting endosome in Arabidopsis root cells. Plant Journal, 53, 237-247

"Ivanov R, Gaude T. Endocytosis and endosomal...". (2005-2010)
Ivanov R, Gaude T. Endocytosis and endosomal regulation of the S-receptor kinase during the self-incompatibility response in Brassica oleracea. Plant Cell. 2009 21:2107-17.

"Pourcher, M.*, Santambrogio M.*, Thazar, N.,...". (2005-2010)
Pourcher, M.*, Santambrogio M.*, Thazar, N., Thierry, A.-M., Fobis-Loisy, I., Miège, C., Jaillais Y, and Gaude, T. 2010 Distinct functions of retromer subcomplexes in plant development and protein sorting. Plant Cell, 12, 3980-91

2005

"Roudier F., Fernandez A.G., Fujita M.,...". (2005)
Roudier F., Fernandez A.G., Fujita M., Schindelman G., Borner G.H., Himmelspach R., Song, S., Dupree P., Baskin T.I., Wasteneys G.O. and Benfey P.N. (2005). COBRA, an Arabidopsis extracellular Glycosyl-Phosphatidyl-Inositol-anchored protein, specifically controls highly anisotropic expansion through its involvement in cellulose microfibril orientation. Plant Cell 17, 1749-63. PMID:15849274. F1000 [1].

"Nicolas M, Marais G, Hykelova V, Janousek B,...". (2005)
Nicolas M, Marais G, Hykelova V, Janousek B, Laporte V, Vyskot B, Mouchiroud D, Negrutiu I, Charlesworth D, Monéger F (2005) A gradual process of recombination restriction in the evolutionary history of the sex chromosomes in dioecious plants. PLoS Biology 3 : 47-56.

"Scutt CP, Vinauger-Douard M, Fourquin C,...". (2005)
Scutt CP, Vinauger-Douard M, Fourquin C, Finet C, Dumas C (2005). A portrait of the ancestral flower. Flowering Newsletter 39 : 3-8.

"Jenkins TH, Li JH, Scutt CP, Gilmartin PM...". (2005)
Jenkins TH, Li JH, Scutt CP, Gilmartin PM (2005) Analysis of members of the Silene latifolia Cys(2)/His(2) zinc-finger transcription factor family during dioecious flower development and in a novel stamen-defective mutant ssf1. Planta 220 : 559-571.

"Gerats T, Vandenbussche M (2005) A model...". (2005)
Gerats T, Vandenbussche M (2005) A model system for comparative research : Petunia. Trends Plant Sci 10 : 251-256.


"Fourquin C, Vinauger-Douard M, Fogliani B,...". (2005)
Fourquin C, Vinauger-Douard M, Fogliani B, Dumas C, Scutt CP (2005) Evidence that CRABS CLAW and TOUSLED have conserved their roles in carpel development since the ancestor of the extant angiosperms. PNAS 102 : 4649-4654.


Vernoux T, Benfey PN "Signals that regulate stem cell activity during plant development". Current Opinion in Genetics & Development 4 388-394 (2005)
PMID : 15967658

2004

"Vandenbussche M, Zethof J, Royaert S,...". (2004)
Vandenbussche M, Zethof J, Royaert S, Weterings K, Gerats T (2004) The duplicated B-class heterodimer model : whorl-specific effects and complex genetic interactions in Petunia hybrida flower development. Plant Cell 16 : 741-754.


"Ferrario S, Busscher J, Franken J, Gerats T,...". (2004)
Ferrario S, Busscher J, Franken J, Gerats T, Vandenbussche M, Angenent GC, Immink RG (2004) Ectopic expression of the petunia MADS box gene UNSHAVEN accelerates flowering and confers leaf-like characteristics to floral organs in a dominant-negative manner. Plant Cell 16 : 1490-1505.


"Breuil-Broyer S, Morel P, de Almeida-Engler...". (2004)
Breuil-Broyer S, Morel P, de Almeida-Engler J, Coustham V, Negrutiu I and Trehin C (2004) High-resolution boundary analysis during Arabidopsis thaliana flower development. Plant Journal 38 : 182-192.

Guyomarc'h S, Vernoux T, Traas J, Zhou DX, Delarue M "MGOUN3, an Arabidopsis gene with TetratricoPeptide-Repeat-related motifs, regulates meristem cellular organization". Journal of Experimental Botany 397 673-684 (2004)
PMID : 14966212

Furutani M, Vernoux T, Traas J, Kato T, Tasaka M, Aida M "PIN-FORMED1 and PINOID regulate boundary formation and cotyledon development in Arabidopsis embryogenesis". Development 20 5021-5030 (2004)
PMID : 15371311

Grandjean O, Vernoux T, Laufs P, Belcram K, Mizukami Y, Traas J "In vivo analysis of cell division, cell growth, and differentiation at the shoot apical meristem in Arabidopsis". Plant Cell 1 74-87 (2004)
PMID : 14671026

2003

"Roudier F., Fedorova E., Lebris M., Lecomte...". (2003)
Roudier F., Fedorova E., Lebris M., Lecomte P., Györgyey J., Vaubert D., Abad P., Kondorosi A. and Kondorosi E. (2003). The Medicago A2-type cyclin is auxin regulated and involved in meristem formation but dispensable for endoreduplication-associated developmental programs. Plant Phys. 131, 1-13. PMID:12644661

"Vinardell, J.M., Fedorova, E., Cebolla A,...". (2003)
Vinardell, J.M., Fedorova, E., Cebolla A, Kevei, Z., Horvath, G., Kelemen Z., Tarayre S., Roudier F., Mergaert, P., Kondorosi, A. and Kondorosi, E. (2003). Endoreduplication mediated by the anaphase-promoting complex activator CCS52A is required for symbiotic cell differentiation in Medicago truncatula nodules. Plant Cell 15, 2093-2105. PMID:12953113. F1000 [1].

"Vandenbussche M, Zethof J, Souer E, Koes R,...". (2003)
Vandenbussche M, Zethof J, Souer E, Koes R, Tornielli GB, Pezzotti M, Ferrario S, Angenent GC, Gerats T (2003) Toward the analysis of the petunia MADS box gene family by reverse and forward transposon insertion mutagenesis approaches : B, C, and D floral organ identity functions require SEPALLATA-like MADS box genes in petunia. Plant Cell 15 : 2680-2693.

"Vandenbussche M, Theissen G, Van de Peer Y,...". (2003)
Vandenbussche M, Theissen G, Van de Peer Y, Gerats T (2003) Structural diversification and neo-functionalization during floral MADS-box gene evolution by C-terminal frameshift mutations. Nucleic Acids Res 31 : 4401-4409.


"Scutt CP, Vinauger-Douard M, Fourquin C,...". (2003)
Scutt CP, Vinauger-Douard M, Fourquin C, Ailhas J, Kuno N, Uchida K, Gaude T, Furuya M, Dumas C (2003). The identification of candidate genes for a reverse genetic analysis of development and function in the Arabidopsis gynoecium. Plant Physiology 132 : 653-665.

2002

"Roudier F., Schindelman G, DeSalle R. and...". (2002)
Roudier F., Schindelman G, DeSalle R. and Benfey P. N. (2002). The COBRA family of putative GPI-anchored proteins in Arabidopsis : a new fellowship in expansion. Plant Phys. 130 : 538-48. PMID:12376623

"Vandenbussche M, Tom Gerats T (2002) PCR...". (2002)
Vandenbussche M, Tom Gerats T (2002) PCR cloning approaches In : In P.M. Gilmartin and C. Bowler, editors, Molecular Plant Biology Vol I : A Practical Approach. Oxford University Press.

"Teakle GR, Scutt CP, Gilmartin PM (2002)...". (2002)
Teakle GR, Scutt CP, Gilmartin PM (2002) Transcript analysis. In P.M. Gilmartin and C. Bowler, editors, Molecular Plant Biology Vol II : A Practical Approach. Oxford University Press, pages 1-40.

"Scutt CP, Zubko E, Meyer P (2002) Techniques...". (2002)
Scutt CP, Zubko E, Meyer P (2002) Techniques for the removal of marker genes from transgenic plants. Biochimie 84 : 1119-1126.

"Scutt CP, Jenkins T, Furuya M, Gilmartin PM...". (2002)
Scutt CP, Jenkins T, Furuya M, Gilmartin PM (2002) Male specific genes from dioecious white campion identified by fluorescent differential display. Plant and Cell Physiology 43 : 563-572.

Traas J, Vernoux T. "The shoot apical meristem : the dynamics of a stable structure". Philosophical Transactions of the Royal Society of London. Series B, Biological sciences 1422 737-747 (2002)
PMID : 12079669

Aida M*, Vernoux T*, Furutani M, Traas J, Tasaka M "Roles of PIN-FORMED1 and MONOPTEROS in pattern formation of the apical region of the Arabidopsis embryo". Development 17 3965-3974 (2002)
PMID : 12163400

2000-2005

"Giranton JL, Dumas C, Cock JM, Gaude T. The...". (2000-2005)
Giranton JL, Dumas C, Cock JM, Gaude T. The integral membrane S-locus receptor kinase of Brassica has serine/threonine kinase activity in a membranous environment and spontaneously forms oligomers in planta. PNAS. 2000 28 ;97:3759-64.

"Giranton JL, Dumas C, Cock JM, Gaude T. The...". (2000-2005)
Giranton JL, Dumas C, Cock JM, Gaude T. The integral membrane S-locus receptor kinase of Brassica has serine/threonine kinase activity in a membranous environment and spontaneously forms oligomers in planta. PNAS. 2000 28 ;97:3759-64.

"Cabrillac D, Cock JM, Dumas C, Gaude T. The...". (2000-2005)
Cabrillac D, Cock JM, Dumas C, Gaude T. The S-locus receptor kinase is inhibited by thioredoxins and activated by pollen coat proteins. Nature. 2001 8 ;410:220-3.

"Vanoosthuyse V, Tichtinsky G, Dumas C, Gaude...". (2000-2005)
Vanoosthuyse V, Tichtinsky G, Dumas C, Gaude T, Cock JM. Interaction of calmodulin, a sorting nexin and kinase-associated protein phosphatase with the Brassica oleracea S locus receptor kinase. Plant Physiology. 2003 133:919-29.

2000

"Kondorosi E., Roudier F. and Gendreau E....". (2000)
Kondorosi E., Roudier F. and Gendreau E. (2000). Plant cell-size control : growing by ploidy ? Curr. Opin. Plant Biol. 6, 488-492. PMID:11074380

"Roudier F., Fedorova E., Györgyey J., Feher...". (2000)
Roudier F., Fedorova E., Györgyey J., Feher A., Brown S., Kondorosi A. and Kondorosi E. (2000). Cell cycle function of a Medicago A2-type cyclin and its interaction with the A-type cyclin-dependent kinase and the Rb protein. Plant J. 23, 73-83. PMID:10929103

"Zubko E, Scutt C, Meyer P (2000) Intrachromosomal". (2000)
Zubko E, Scutt C, Meyer P (2000) Intrachromosomal recombination between attP regions allows efficient removal of selectable marker genes from transgenic tobacco plants. Nature Biotechnology 18 : 442-445.

Vernoux T, Wilson RC, Seeley KA, Reichheld JP, Muroy S, Brown S, Maughan SC, Cobbett CS, Van Montagu M, Inze D, May MJ, Sung ZR "The ROOT MERISTEMLESS1/CADMIUM SENSITIVE2 gene defines a glutathione-dependent pathway involved in initiation and maintenance of cell division during postembryonic root development". Plan Cell 1 97-110 (2000)
PMID : 10634910

Vernoux T, Kronenberger J, Grandjean O, Laufs P, Traas J " PIN-FORMED 1 regulates cell fate at the periphery of the shoot apical meristem". Development 23 5157-5165 (2000)
PMID : 11060241

Vernoux T, Autran D, Traas J "Developmental control of cell division patterns in the shoot apex". Plant Molecular Biology 5-6 569-581 (2000)
PMID : 11089861

1999

"Cebolla A., Vinardell J.M., Kiss E., Olah B.,...". (1999)
Cebolla A., Vinardell J.M., Kiss E., Olah B., Roudier F., Kondorosi A. and Kondorosi E. (1999). The mitotic inhibitor ccs52 is required for endoreduplication and ploidy-dependent cell enlargement in plants. EMBO J. 18, 4476-4484. PMID:10449413

Reichheld J-P, Vernoux T, Lardon F, Van Montagu M, Inzé D "Specific checkpoints regulate plant cell cycle progression in response to oxidative stress". The Plant Journal 6 647-656 (1999)
https://doi.org/10.1046/j.1365-313X...

1998

May MJ, Vernoux T, Leaver C, Montagu MV, Inzé D "Glutathione homeostasis in plants : implications for environmental sensing and plant development". Journal of Experimental Botany 321 649-667 (1998)
https://doi.org/10.1093/jxb/49.321.649

May MJ, Vernoux T, Sanchez-Fernandez R, Van Montagu M, Inze D "Evidence for posttranscriptional activation of gamma-glutamylcysteine synthetase during plant stress responses". PNAS 20 12049-12054 (1998)
PMID : 9751788

Minc N, Boudaoud A, Chang F. "Mechanical Forces of Fission Yeast Growth.". Curr Biol. 24 1436
PMID : 28903054