Nextflow
Learn to use Nextflow a pipeline manager
The sources for this partical can be found here
This works are licensed under a Creative Commons Attribution-ShareAlike 4.0 International License.
You will learn to:
- build your own pipeline from the scripts available on the gitlab
- test your pipeline on your computer
- run the same pipeline on the PSMN
For this TP you will need:
- an account at the PSMN (I will be your person in charge of the account opening)
- if you choose to work on your own laptop :
- a terminal client with ssh
- a working docker installation
- java >= 1.8