Les deux révisions précédentesRévision précédenteProchaine révision | Révision précédente |
documentation:examples:modules [2018/01/05 13:24] – [Environment Modules] ltaulell | documentation:examples:modules [2023/01/13 09:37] (Version actuelle) – supprimée ccalugar |
---|
====== Environment Modules ====== | |
| |
<note warning>FIXME update needed</note> | |
| |
===== Usage ===== | |
| |
* Charger l'environnement du PSMN | |
<code> | |
module use /usr/local/Modules | |
</code> | |
| |
* Lister les modules disponibles | |
<code> | |
module avail | |
</code> | |
| |
* Charger un module (commande utilisable dans un script) | |
<code> | |
module use soft/version | |
</code> | |
| |
| |
===== Modules disponibles (Novembre 2014) ===== | |
| |
<code> | |
~$ module avail | |
| |
---------------------------- /applis/PSMN/Modules ----------------------------- | |
ADF/2010.02 FastTree/2.1.7 Primer3/2.3.4 | |
ADF/2012.01 GMAP/2014-10-22 R/2.15.1 | |
ADF/2013.01 Gaussian/g03-lasim R/3.0.2 | |
ADF/2013.01.intelmpi Gaussian/g09-chimie RSeQC/2.3.1 | |
ADF/2013.01.platformmpi Gaussian/g09-geol RSeQC/2.3.3 | |
Abinit/7.2.1-gnu-4.7.2-x86_64 Gaussian/g09c01-chimie SAMtools/1.1 | |
Abinit/7.6.4 Gaussian/g09c01-geol Spinevolution/3.4.4 | |
AllPathsLG/r42874-gnu-4.7.1 Gaussian/g09c01-icbms Spinevolution/3.4.5 | |
Amber/12-intel-14.0.1-openmp Gaussian/g09d01-chimie Trinity/r2012-06-08 | |
Amber/12-intel-14.0.1-openmpi-1.6.4 Gaussian/g09d01-geol Trinity/r20140413 | |
Amber/12-intel-14.0.1-openmpi-1.6.4-K20-DPDP Gaussian/g09d01-icbms Trinity/r20140717 | |
Amber/12-intel-14.0.1-openmpi-1.6.4-K20-SPFP Gaussian/g09d01-lasim VASP/4.6.36-gnu-4.7.2 | |
Amber/12-intel-14.0.1-openmpi-1.6.4-M2070-DPDP HTSeq/0.5.3p3 VASP/5.3.2-intel-11.1-debian7 | |
Amber/12-intel-14.0.1-openmpi-1.6.4-M2070-SPFP HTSeq/0.5.3p9 VASP/5.3.3-gnu-4.7.2 | |
Amber/12-intel-14.0.1-seq HTSlib/1.1 VASP/5.3.3-intel-14.0.1-debian7 | |
Amber/12-intel-14.0.1-seq-K20-DPDP Lammps/11Nov13-mpi-1.6.4-intel-14.0.1 VASP/5.3.5-intel-14.0.1-debian7 | |
Amber/12-intel-14.0.1-seq-K20-SPFP Lammps/28Jun14-mpi-1.6.4-intel-14.0.1 VESTA/3.1.7 | |
Amber/12-intel-14.0.1-seq-M2070-DPDP MAFFT/7.187 VMD/1.9.1 | |
Amber/12-intel-14.0.1-seq-M2070-SPFP MIRA/4.0.2 Velvet/1.2.10 | |
BCFtools/1.1 Matlab/R2011b aTRAM/1.01 | |
BLAT/35 Molden/5.0.6 fftw/3.3.3-intel-14.0.1 | |
Base/debian7 Molpro/2010.1-intel-14.0.1 fftw/3.3.3-intel-14.0.1-mpi-1.6.4 | |
Base/psmn Molpro/2010.1-intel-14.0.1-openmp fftw/3.3.3-intel-14.0.1-openmp | |
Base/sge MrBayes/3.2.1-intel-mpi intel/11.1.069 | |
Base/test MrBayes/3.2.1-intel-seq intel/12.0.084 | |
Bowtie/0.12.7 Oases/0.2.8 intel/14.0.1 | |
Bowtie/2.0.2 OpenAlea/svn-r4239 modules.psmn | |
CP2K/2.2.426 ParaView/3.12.0 openmpi/1.4.1-intel-11.1.069 | |
CP2K/2.5.1 ParaView/4.0.1 openmpi/1.4.5-gnu-4.7.2 | |
CP2K/2.5.1-complete PhyML/20120412 openmpi/1.5.4-gnu-4.7.2 | |
CP2K/2.5.1-minimal PhyML/20140223 openmpi/1.5.4-intel-12.0.084 | |
Cassandra/2.5.4 PhyML/3.0 openmpi/1.6.4-gnu-4.7.2 | |
Celera/WGS-7.0 Phylobayes/3.3b openmpi/1.6.4-intel-12.0.084 | |
Corset/1.03 Phylobayes/3.3e openmpi/1.6.4-intel-14.0.1 | |
| |
</code> | |