Différences
Ci-dessous, les différences entre deux révisions de la page.
| Prochaine révision | Révision précédenteDernière révisionLes deux révisions suivantes | ||
| en:documentation:tutorials:submit [2018/01/17 06:59] – créée cicaluga | en:documentation:tutorials:submit [2020/08/25 15:58] – créée - modification externe 127.0.0.1 | ||
|---|---|---|---|
| Ligne 2: | Ligne 2: | ||
| - | The batch system currently used at the PSMN is Sun Grid Engine (SGE). Its documentation is [[documentation: | + | The batch system currently used at the PSMN is Sun Grid Engine (SGE). |
| + | |||
| + | Its documentation is [[en:documentation: | ||
| Ligne 40: | Ligne 42: | ||
| #$ -N SommeVecVecPAR | #$ -N SommeVecVecPAR | ||
| ### queue (to change) | ### queue (to change) | ||
| - | #$ -q E5-2670_test | + | #$ -q E5_test |
| ### parallel environment & nb cpu (NSLOTS) (to change) | ### parallel environment & nb cpu (NSLOTS) (to change) | ||
| #$ -pe test_debian 2 | #$ -pe test_debian 2 | ||
| Ligne 56: | Ligne 58: | ||
| # important, otherwise the program is running since ~/ | # important, otherwise the program is running since ~/ | ||
| cd ${SGE_O_WORKDIR} | cd ${SGE_O_WORKDIR} | ||
| + | |||
| + | # init env (should be in ~/.profile) | ||
| + | source / | ||
| ### configure the environment (to change) | ### configure the environment (to change) | ||
| - | + | module load iccifort/2017.4 | |
| - | module load intel/2017.4/impi/2017.3.196 | + | module load intel/2017.4b/OpenMPI/3.0.0 |
| ### au besoin, forcer l'env OpenMPI | ### au besoin, forcer l'env OpenMPI | ||
| - | PREFIX="/ | + | PREFIX="/ |
| MPIRUN=${PREFIX}/ | MPIRUN=${PREFIX}/ | ||
| ### program execution (to change with your executable) | ### program execution (to change with your executable) | ||
| ### | ### | ||
| - | ### | + | ### |
| - | #mpirun -v -np ${NSLOTS} ${EXECDIR}/ | + | |
| - | ${MPIRUN} -v -prefix ${PREFIX} -mca btl sm, | + | ${MPIRUN} -v -prefix ${PREFIX} -mca btl vader, |
| # fin | # fin | ||
| Ligne 79: | Ligne 84: | ||
| ====== Surveiller un job ====== | ====== Surveiller un job ====== | ||
| - | See [[documentation: | + | See corresponding |