Différences
Ci-dessous, les différences entre deux révisions de la page.
| Les deux révisions précédentesRévision précédenteProchaine révision | Révision précédenteDernière révisionLes deux révisions suivantes | ||
| documentation:tools:langages:python:modules [2020/05/26 09:22] – ltaulell | documentation:tools:langages:python:modules [2021/09/09 13:43] – [Python 3.8.3] ltaulell | ||
|---|---|---|---|
| Ligne 5: | Ligne 5: | ||
| <WRAP col3> | <WRAP col3> | ||
| - | * alabaster | + | |
| - | * appdirs | + | |
| - | * attrs | + | * anndata |
| - | * backcall | + | * annoy |
| - | * beniget | + | * appdirs |
| - | * bigfloat | + | * asciitree |
| - | * biopython | + | * astroid |
| - | * CacheControl | + | * atomicwrites |
| - | * certifi | + | * attrs |
| - | * cffi 1.14.0 | + | * autopep8 |
| - | * chardet | + | * Babel 2.8.0 |
| - | * click | + | * backcall |
| - | * coloredlogs | + | * beniget |
| - | * colormath | + | * bigfloat |
| - | * ConfigArgParse | + | * biopython |
| - | * cutadapt | + | * black |
| - | * cycler | + | * bleach |
| - | * Cython | + | * CacheControl |
| - | * datrie | + | * certifi |
| - | * decorator | + | * cffi 1.14.0 |
| - | * DendroPy | + | * chardet |
| - | * dill 0.3.1.1 | + | * chromosight |
| - | * dnaio | + | * click |
| - | * docutils | + | * cloudpickle |
| - | * drmaa | + | * ClusterShell |
| - | * entrypoints | + | * cmake |
| - | * ete3 3.1.1 | + | * colorama |
| - | * execo | + | * coloredlogs |
| - | * fabio | + | * colormath |
| - | * freetype-py | + | * ConfigArgParse |
| - | * frozendict | + | * cooler |
| - | * future | + | * cryptography |
| - | * gast 0.3.3 | + | * cutadapt |
| - | * gitdb | + | * cycler |
| - | * GitPython | + | * Cython |
| - | * gnureadline | + | * cytoolz |
| - | * gprof2dot | + | * datrie |
| - | * graphviz | + | * decorator |
| - | * h5py 2.10.0 | + | * defusedxml |
| - | * hdf5plugin | + | * demuxEM |
| - | * hdf5storage | + | * DendroPy |
| - | * hdmedians | + | * diff-match-patch |
| - | * HTSeq | + | * dill 0.3.1.1 |
| - | * humanfriendly | + | * dnaio |
| - | * idna 2.9 | + | * docopt |
| - | * intervaltree | + | * docutils |
| - | * invoke | + | * drmaa |
| - | * ipykernel | + | * entrypoints |
| - | * ipython | + | * ete3 3.1.1 |
| - | * ipython-genutils | + | * execo |
| - | * jedi 0.17.0 | + | * fabio |
| - | * Jinja2 | + | * fasteners |
| - | * joblib | + | * fbpca 1.0 |
| - | * jsonschema | + | * fitsne |
| - | * jupyter-client | + | * flake8 |
| - | * jupyter-core | + | * Flask |
| - | * kiwisolver | + | * Flask-WTF |
| - | * lockfile | + | * forceatlas2-python |
| - | * lxml 4.5.1 | + | * freetype-py |
| - | * lzstring | + | * frozendict |
| - | * Mako 1.1.2 | + | * future |
| - | * Markdown | + | * gast 0.3.3 |
| - | * MarkupSafe | + | * geosketch |
| - | * matplotlib | + | * gitdb |
| - | * Mikado | + | * GitPython |
| - | * more-itertools | + | * gnureadline |
| - | * mpmath | + | * gprof2dot |
| - | * msgpack | + | * gprofiler-official |
| - | * multiprocess | + | * graphviz |
| - | * multiqc | + | * h5py 2.10.0 |
| - | * mysql-connector | + | * harmony-pytorch |
| - | * natsort | + | * hdf5plugin |
| - | * nbformat | + | * hdf5storage |
| - | * networkx | + | * hdmedians |
| - | * nose 1.3.7 | + | * helpdev |
| - | * numpy | + | * hicstuff |
| - | * packaging | + | * hnswlib |
| - | * pandas | + | * HTSeq |
| - | * parso | + | * humanfriendly |
| - | * pathos | + | * idna 2.9 |
| - | * patsy | + | * imagecodecs |
| - | * pexpect | + | * imageio |
| - | * pickleshare | + | * imagesize |
| - | * Pillow | + | * intel-openmp |
| - | * pip 20.1.1 | + | * intervaltree |
| - | * pkgconfig | + | * invoke |
| - | * pluggy | + | * ipykernel |
| - | * ply | + | * ipython |
| - | * pox | + | * ipython-genutils |
| - | * ppft 1.6.6.1 | + | * isort |
| - | * prompt-toolkit | + | * itsdangerous |
| - | * protobuf | + | * jedi |
| - | * psutil | + | * jeepney |
| - | * ptyprocess | + | * Jinja2 |
| - | * py 1.8.1 | + | * JIT 0.0.1 |
| - | * pybedtools | + | * joblib |
| - | * pyBigWig | + | * json5 0.9.5 |
| - | * pycparser | + | * jsonschema |
| - | * pyfaidx | + | * jupyter-client |
| - | * pyfasta | + | * jupyter-console |
| - | * Pygments | + | * jupyter-core |
| - | * PyOpenGL | + | * jupyterlab |
| - | * pyparsing | + | * jupyterlab-server |
| - | * PyQt5 | + | * keyring |
| - | * PyQt5-sip | + | * kiwisolver |
| - | * pyrsistent | + | * lazy-object-proxy |
| - | * pysam | + | * leidenalg |
| - | * pytest | + | * lightgbm |
| - | * python-dateutil | + | * llvmlite |
| - | * python-magic | + | * lockfile |
| - | * python-pptx | + | * loguru |
| - | * pythran | + | * loompy |
| - | * pytz 2020.1 | + | * louvain |
| - | * PyVTK | + | * lxml 4.5.1 |
| - | * PyYAML | + | * lzstring |
| - | * pyzmq | + | * Mako 1.1.2 |
| - | * qtconsole | + | * Markdown |
| - | * QtPy 1.9.0 | + | * MarkupSafe |
| - | * ratelimiter | + | * matplotlib |
| - | * requests | + | * mccabe |
| - | * restructuredtext-lint 1.3.0 | + | * Mikado |
| - | * rpy2 3.3.3 | + | * mistune |
| - | * ruamel.yaml | + | * mkl |
| - | * ruamel.yaml.clib | + | * more-itertools |
| - | * scikit-bio | + | * mpi4py |
| - | * scikit-learn | + | * mpmath |
| - | * scipy | + | * msgpack |
| - | * seaborn | + | * multiprocess |
| - | * setuptools | + | * multiqc |
| - | * silx 0.12.0 | + | * mysql-connector |
| - | * simplejson | + | * natsort |
| - | * six | + | * nbconvert |
| - | * smmap | + | * nbformat |
| - | * snakemake | + | * ndim 0.1.4 |
| - | * sortedcontainers | + | * networkx |
| - | * spectra | + | * nose 1.3.7 |
| - | * SQLAlchemy | + | * notebook |
| - | * SQLAlchemy-Utils | + | * numba |
| - | * statsmodels | + | * numcodecs |
| - | * tabulate | + | * numpy |
| - | * threadpoolctl | + | * numpy-groupies |
| - | * toposort | + | * numpydoc |
| - | * tornado | + | * opencv-contrib-python |
| - | * traitlets | + | * orthopy |
| - | * tzlocal | + | * packaging |
| - | * ujson 2.0.3 | + | * pandas |
| - | * urllib3 | + | * pandocfilters |
| - | * vext 0.7.3 | + | * parso 0.5.2 |
| - | * vext.wx | + | * pathos |
| - | * vispy | + | * pathspec |
| - | * wcwidth | + | * pathtools |
| - | * wheel | + | * patsy |
| - | * wrapt | + | * pegasusio |
| - | * XlsxWriter | + | * pegasuspy |
| - | * xopen | + | * pexpect |
| - | * zipfile2 | + | * pickleshare |
| + | * Pillow | ||
| + | * pip 21.2.4 | ||
| + | * pkgconfig | ||
| + | * plotly | ||
| + | * pluggy | ||
| + | * ply | ||
| + | * pox | ||
| + | * ppft 1.6.6.1 | ||
| + | * prometheus-client | ||
| + | * prompt-toolkit | ||
| + | * protobuf | ||
| + | * psrecord | ||
| + | * psutil | ||
| + | * psycopg2 | ||
| + | * ptyprocess | ||
| + | * py 1.8.1 | ||
| + | * pyarrow | ||
| + | * pybedtools | ||
| + | * pyBigWig | ||
| + | * pybind11 | ||
| + | * pycodestyle | ||
| + | * pycparser | ||
| + | * pydocstyle | ||
| + | * pyfaidx | ||
| + | * pyfasta | ||
| + | * pyfastx | ||
| + | * pyflakes | ||
| + | * Pygments | ||
| + | * pylint | ||
| + | * pynndescent | ||
| + | * PyOpenGL | ||
| + | * pypairix | ||
| + | * pyparsing | ||
| + | * PyQt5 | ||
| + | * PyQt5-sip | ||
| + | * pyqtgraph | ||
| + | * PyQtWebEngine | ||
| + | * pyrsistent | ||
| + | * pysam | ||
| + | * pytest | ||
| + | * python-dateutil | ||
| + | * python-igraph | ||
| + | * python-jsonrpc-server | ||
| + | * python-language-server | ||
| + | * python-magic | ||
| + | * python-pptx | ||
| + | * pythran | ||
| + | * pytz 2020.1 | ||
| + | * PyVTK | ||
| + | * PyWavelets | ||
| + | * pyxdg 0.26 | ||
| + | * PyYAML | ||
| + | * pyzmq | ||
| + | * QDarkStyle | ||
| + | * QtAwesome | ||
| + | * qtconsole | ||
| + | * QtPy 1.9.0 | ||
| + | * quadpy | ||
| + | * ratelimiter | ||
| + | * rebound | ||
| + | * regex | ||
| + | * requests | ||
| + | * restructuredtext-lint | ||
| + | * retrying | ||
| + | * rope 0.17.0 | ||
| + | * rpy2 3.3.3 | ||
| + | * ruamel.yaml | ||
| + | * ruamel.yaml.clib | ||
| + | * scanorama | ||
| + | * scikit-bio | ||
| + | * scikit-image | ||
| + | * scikit-learn | ||
| + | * scikit-misc | ||
| + | * scipy | ||
| + | * seaborn | ||
| + | * SecretStorage | ||
| + | * Send2Trash | ||
| + | * serpentine | ||
| + | * setuptools | ||
| + | * silx 0.12.0 | ||
| + | * simplejson | ||
| + | * six | ||
| + | * sklearn | ||
| + | * smmap | ||
| + | * snakemake | ||
| + | * snowballstemmer | ||
| + | * sortedcontainers | ||
| + | * spectra | ||
| + | * Sphinx | ||
| + | * sphinxcontrib-applehelp | ||
| + | * sphinxcontrib-devhelp | ||
| + | * sphinxcontrib-htmlhelp | ||
| + | * sphinxcontrib-jsmath | ||
| + | * sphinxcontrib-qthelp | ||
| + | * sphinxcontrib-serializinghtml 1.1.4 | ||
| + | * spyder | ||
| + | * spyder-kernels | ||
| + | * SQLAlchemy | ||
| + | * SQLAlchemy-Utils | ||
| + | * statsmodels | ||
| + | * sympy 1.6 | ||
| + | * tabulate | ||
| + | * tbb | ||
| + | * terminado | ||
| + | * testpath | ||
| + | * texttable | ||
| + | * threadpoolctl | ||
| + | * tifffile | ||
| + | * tinycov | ||
| + | * toml 0.10.1 | ||
| + | * toolz | ||
| + | * toposort | ||
| + | * torch 1.7.1 | ||
| + | * tornado | ||
| + | * tqdm 4.47.0 | ||
| + | * traitlets | ||
| + | * typed-ast | ||
| + | * typing-extensions | ||
| + | * tzlocal | ||
| + | * ujson 1.35 | ||
| + | * umap-learn | ||
| + | * urllib3 | ||
| + | * vext 0.7.3 | ||
| + | * vext.wx | ||
| + | * vispy | ||
| + | * watchdog | ||
| + | * wcwidth | ||
| + | * webencodings | ||
| + | * Werkzeug | ||
| + | * wheel | ||
| + | * wrapt | ||
| + | * WTForms | ||
| + | * wurlitzer | ||
| + | * xlrd 2.0.1 | ||
| + | * XlsxWriter | ||
| + | * xopen | ||
| + | * yapf 0.30.0 | ||
| + | * zarr 2.6.1 | ||
| + | * zipfile2 | ||
| </ | </ | ||
| Ligne 167: | Ligne 307: | ||
| <WRAP col3> | <WRAP col3> | ||
| + | * alabaster | ||
| * altgraph | * altgraph | ||
| * appdirs | * appdirs | ||
| Ligne 177: | Ligne 318: | ||
| * beniget | * beniget | ||
| * bigfloat | * bigfloat | ||
| - | * biopython | + | * biopython |
| * bitarray | * bitarray | ||
| * bitstring | * bitstring | ||
| Ligne 183: | Ligne 324: | ||
| * blist 1.3.6 | * blist 1.3.6 | ||
| * bx-python | * bx-python | ||
| - | * certifi | + | * certifi |
| * cffi | * cffi | ||
| * chardet | * chardet | ||
| * click 6.7 | * click 6.7 | ||
| * clint 0.5.1 | * clint 0.5.1 | ||
| + | * cmake 3.17.3 | ||
| * coloredlogs | * coloredlogs | ||
| * colorlog | * colorlog | ||
| Ligne 199: | Ligne 341: | ||
| * datrie | * datrie | ||
| * deap 1.0.2 | * deap 1.0.2 | ||
| - | * decorator | + | * decorator |
| * deepdiff | * deepdiff | ||
| * DendroPy | * DendroPy | ||
| Ligne 229: | Ligne 371: | ||
| * humanfriendly | * humanfriendly | ||
| * idna 2.6 | * idna 2.6 | ||
| + | * imageio | ||
| * importlib | * importlib | ||
| + | * importlib-metadata | ||
| * intervaltree | * intervaltree | ||
| * intervaltree-bio | * intervaltree-bio | ||
| Ligne 239: | Ligne 383: | ||
| * jedi | * jedi | ||
| * Jinja2 | * Jinja2 | ||
| + | * JIT 0.0.1 | ||
| * joblib | * joblib | ||
| * jsonpickle | * jsonpickle | ||
| - | * jsonschema | + | |
| + | | ||
| * jupyter | * jupyter | ||
| * jupyter-client | * jupyter-client | ||
| Ligne 248: | Ligne 394: | ||
| * kiwisolver | * kiwisolver | ||
| * liac-arff | * liac-arff | ||
| - | * llvmlite | + | * llvmlite |
| * lxml 4.2.5 | * lxml 4.2.5 | ||
| * lzstring | * lzstring | ||
| Ligne 255: | Ligne 401: | ||
| * Markdown | * Markdown | ||
| * MarkupSafe | * MarkupSafe | ||
| - | * matplotlib | + | * matplotlib |
| * Mikado | * Mikado | ||
| * mistune | * mistune | ||
| * mock 2.0.0 | * mock 2.0.0 | ||
| - | * mpi4py | + | * mpi4py |
| * mpmath | * mpmath | ||
| + | * msgpack | ||
| * multiprocess | * multiprocess | ||
| - | * multiqc | + | * multiqc |
| * mysql-connector | * mysql-connector | ||
| * nbconvert | * nbconvert | ||
| * nbformat | * nbformat | ||
| + | * ndim 0.1.4 | ||
| * netaddr | * netaddr | ||
| * netifaces | * netifaces | ||
| - | * networkx | + | |
| + | | ||
| * nose 1.3.7 | * nose 1.3.7 | ||
| * notebook | * notebook | ||
| - | * numba 0.49.1 | + | * numba 0.50.1 |
| * numexpr | * numexpr | ||
| * numpy 1.19.0rc1 | * numpy 1.19.0rc1 | ||
| * numpy-groupies | * numpy-groupies | ||
| + | * orthopy | ||
| * pandas | * pandas | ||
| * pandocfilters | * pandocfilters | ||
| Ligne 285: | Ligne 435: | ||
| * pexpect | * pexpect | ||
| * pickleshare | * pickleshare | ||
| - | * Pillow | + | * Pillow |
| - | * pip 20.2b1 | + | * pip 20.2.2 |
| * pkgconfig | * pkgconfig | ||
| + | * plotly | ||
| * pluggy | * pluggy | ||
| * ply 3.11 | * ply 3.11 | ||
| Ligne 299: | Ligne 450: | ||
| * pyasn1 | * pyasn1 | ||
| * pybedtools | * pybedtools | ||
| + | * pyBigWig | ||
| * pycosat | * pycosat | ||
| * pycparser | * pycparser | ||
| * pycrypto | * pycrypto | ||
| - | * pyDNase | ||
| * pyfaidx | * pyfaidx | ||
| * pyfasta | * pyfasta | ||
| Ligne 311: | Ligne 462: | ||
| * pyparsing | * pyparsing | ||
| * PyQt5 5.10.1 | * PyQt5 5.10.1 | ||
| - | * pysam 0.13 | + | |
| + | | ||
| * pytest | * pytest | ||
| * python-dateutil | * python-dateutil | ||
| Ligne 317: | Ligne 469: | ||
| * python-magic | * python-magic | ||
| * python-pptx | * python-pptx | ||
| + | * python-rapidjson | ||
| * pythran | * pythran | ||
| * pytools | * pytools | ||
| * pytz | * pytz | ||
| * PyVTK 0.5.18 | * PyVTK 0.5.18 | ||
| + | * PyWavelets | ||
| * PyYAML | * PyYAML | ||
| * pyzmq 17.0.0b3 | * pyzmq 17.0.0b3 | ||
| * qtconsole | * qtconsole | ||
| * QtPy 1.4.0 | * QtPy 1.4.0 | ||
| + | * quadpy | ||
| * quast 4.6.3 | * quast 4.6.3 | ||
| * ratelimiter | * ratelimiter | ||
| * requests | * requests | ||
| * restructuredtext-lint | * restructuredtext-lint | ||
| + | * retrying | ||
| * rpy2 3.0.1 | * rpy2 3.0.1 | ||
| * rpy2-bioconductor-extensions 0.2.5.dev0 | * rpy2-bioconductor-extensions 0.2.5.dev0 | ||
| * ruamel.yaml | * ruamel.yaml | ||
| - | * scikit-image | + | * scikit-image |
| * scikit-learn | * scikit-learn | ||
| * scipy 1.4.1 | * scipy 1.4.1 | ||
| Ligne 348: | Ligne 504: | ||
| * sortedcontainers | * sortedcontainers | ||
| * spectra | * spectra | ||
| - | * SQLAlchemy | + | * SQLAlchemy |
| * SQLAlchemy-Utils | * SQLAlchemy-Utils | ||
| * sympy 1.1.1 | * sympy 1.1.1 | ||
| Ligne 355: | Ligne 511: | ||
| * terminado | * terminado | ||
| * testpath | * testpath | ||
| + | * tifffile | ||
| * toml | * toml | ||
| * tomlkit | * tomlkit | ||
| Ligne 378: | Ligne 535: | ||
| * xopen 0.3.2 | * xopen 0.3.2 | ||
| * zipfile2 | * zipfile2 | ||
| + | * zipp 3.1.0 | ||
| </ | </ | ||