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Abinit

* ABINIT is a software suite to calculate the optical, mechanical, vibrational, and other observable properties of materials. Starting from the quantum equations of density functional theory, you can build up to advanced applications with perturbation theories based on DFT, and many-body Green's functions (GW and DMFT) .

Version Compilateur Interconnexion chemin d'accès OS modèle de configuration
8.6.3 openmpi-3.0.0-gcc-7.2.0-fftw-3.3.6 Infiniband /applis/PSMN/debian9/software/Local/ABINIT/8.6.3/openmpi-3.0.0-gcc-7.2.0-fftw-3.3.6/bin Debian 9 ABINIT/8.6.3/openmpi-3.0.0-gcc-7.2.0-fftw-3.3.6
8.6.3 openmpi-3.0.0-gcc-7.2.0-fftw-3.3.6-mkl-2017.4 Infiniband /applis/PSMN/debian9/software/Local/ABINIT/8.6.3/openmpi-3.0.0-gcc-7.2.0-fftw-3.3.6/bin Debian 9 ABINIT/8.6.3/openmpi-3.0.0-gcc-7.2.0-fftw-3.3.6-mkl-2017.4
8.10.3 openmpi-3.0.0-gcc-7.2.0-fftw-3.3.6-mkl-2017.4 Infiniband /applis/PSMN/debian9/software/Local/ABINIT/8.10.3/openmpi-3.0.0-gcc-7.2.0-fftw-3.3.6-mkl-2017.4/bin Debian 9 ABINIT/8.10.3/openmpi-3.0.0-gcc-7.2.0-fftw-3.3.6-mkl-2017.4

Pour utiliser les modulefiles, consulter [[documentation:tools:modules|Environment Modules]

Site officiel

Script de soumission (exemple)

qsub parexemple.sh

parexemple.sh
#!/bin/bash
#$ -S /bin/bash
#
#$ -N Test_13_5000K_snps3000 # Job name#### For testing
#$ -q E5_test
#$ -pe test_debian 32
#
### charger l'environnement utilisateur pour SGE
#$ -cwd
### exporter les variables d'environnement sur tous les noeuds d'execution
#$ -V
### mails en debut et fin d'execution
#$ -m be
HOSTFILE=${TMPDIR}/machines
cd ${SGE_O_WORKDIR}
#
### configurer l'environnement
module purge
module load ABINIT/8.6.3/openmpi-3.0.0-gcc-7.2.0-fftw-3.3.6-mkl-2017.4 
PREFIX="/applis/PSMN/debian9/software/Compiler/GCC/7.2.0/OpenMPI/3.0.0"
MPIRUN="${PREFIX}/bin/mpirun"
#
$MPIRUN -v -x LD_LIBRARY_PATH -hostfile ${HOSTFILE} -np ${NSLOTS} abinit < a13_5000K_snps3000.files > a13_5000K_snps3000.log
# fin
documentation/tools/software/abinit.1592389381.txt.gz · Dernière modification : 2020/08/25 15:58 (modification externe)