Prior to use, you MUST acquire a licence key from Georgia Institute of Technology
here at http://exon.gatech.edu/license_download.cgi

GeneMark ES/ET

  • eukaryotic gene finder that can perform gene prediction without curated training sets.
Version Compilateur Interconnexion chemin d'accès OS
4.32 N/A N/A /applis/PSMN/generic/GeneMark/4.32/bin Debian 9
modulefile : GeneMark/4.32

Pour utiliser les modulefiles, consulter Environment Modules

You MUST have a valid licence key located at ~/.gm_key
Get it from http://exon.gatech.edu/license_download.cgi

Usage on PSMN

GeneMark need additionals PERL modules installable from CPAN (see Perl5 for CPAN installation/configuration ):

cpan
> install Hash::Merge
> install Logger::Simple
> install Sub::Uplevel
> install Parallel::ForkManager

Site officiel

documentation/tools/software/genemark.txt · Dernière modification: 2020/08/25 17:58 (modification externe)